RNA–Protein interactions for RNA: ENST00000481980.1

NUP58-212, Transcript of nucleoporin 58, humanhuman

TSL 3

Gene NUP58, Length 605 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP58-212ENST00000481980 TMEM116Q8NCL8 245 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 NPIPB3Q92617 1050 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 CCDC140Q96MF4 163 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 FNDC4Q9H6D8 234 aaPredicted RBP12.53□□□□□ -0.4
NUP58-212ENST00000481980 MLXQ9UH92 298 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 S4R3C0 116 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 FRAS1Q86XX4 4008 aa12.53□□□□□ -0.4
NUP58-212ENST00000481980 TMEM213A2RRL7 107 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 A8MWP6 167 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 PRSS46E5RG02 174 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 TPT1P13693 172 aaKnown RBP12.52□□□□□ -0.41
NUP58-212ENST00000481980 FCGR2BP31994 310 aaPredicted RBP12.52□□□□□ -0.41
NUP58-212ENST00000481980 RELQ04864 619 aaPredicted RBP12.52□□□□□ -0.41
NUP58-212ENST00000481980 ARL16Q0P5N6 197 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 VWC2Q2TAL6 325 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 EIF5AL1Q6IS14 154 aaKnown RBP12.52□□□□□ -0.41
NUP58-212ENST00000481980 BTNL8Q6UX41 500 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 ZNF502Q8TBZ5 544 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 OVOL2Q9BRP0 275 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 GGTLC1Q9BX51 225 aa12.52□□□□□ -0.41
NUP58-212ENST00000481980 OR2T8A6NH00 312 aa12.51□□□□□ -0.41
NUP58-212ENST00000481980 S100A7P31151 101 aa12.51□□□□□ -0.41
NUP58-212ENST00000481980 CAMLGP49069 296 aa12.51□□□□□ -0.41
NUP58-212ENST00000481980 OPCMLQ14982 345 aa12.51□□□□□ -0.41
NUP58-212ENST00000481980 LGALSLQ3ZCW2 172 aaPredicted RBP12.51□□□□□ -0.41
NUP58-212ENST00000481980 GNPNAT1Q96EK6 184 aaPredicted RBP12.51□□□□□ -0.41
NUP58-212ENST00000481980 LOC102724200A0A096LPH7 203 aaPredicted RBP12.5□□□□□ -0.41
NUP58-212ENST00000481980 TGOLN2O43493 480 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 CFDP00746 253 aaPredicted RBP12.5□□□□□ -0.41
NUP58-212ENST00000481980 CLEC3BP05452 202 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 SELENOTP62341 195 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 MLANAQ16655 118 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 S100A7AQ86SG5 101 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 HSD17B11Q8NBQ5 300 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 LINC00476Q8WZB0 136 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 TRGV9Q99603 122 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 PARD6GQ9BYG4 376 aaPredicted RBP12.5□□□□□ -0.41
NUP58-212ENST00000481980 WDR61Q9GZS3 305 aaKnown RBP12.5□□□□□ -0.41
NUP58-212ENST00000481980 WDR83OSQ9Y284 106 aa12.5□□□□□ -0.41
NUP58-212ENST00000481980 TM4SF20Q53R12 229 aa12.49□□□□□ -0.41
NUP58-212ENST00000481980 RPL7L1Q6DKI1 246 aaKnown RBP12.49□□□□□ -0.41
NUP58-212ENST00000481980 Q6ZRG5 221 aa12.49□□□□□ -0.41
NUP58-212ENST00000481980 BPIFCQ8NFQ6 507 aa12.49□□□□□ -0.41
NUP58-212ENST00000481980 Q8WTZ3 238 aa12.49□□□□□ -0.41
NUP58-212ENST00000481980 TRAV25A0A0B4J276 109 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 YIF1AO95070 293 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 IGLC1P0CG04 106 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 C8orf88P0DMB2 117 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 ZNF600Q6ZNG1 722 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 CYP2G1PQ6ZSU1 146 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 THAP8Q8NA92 274 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 MARC2Q969Z3 335 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 PFDN2Q9UHV9 154 aa12.48□□□□□ -0.41
NUP58-212ENST00000481980 KMT2AQ03164 3969 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 AGPAT2O15120 278 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 RD3LP0DJH9 198 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 YPEL3P61236 119 aaPredicted RBP12.47□□□□□ -0.41
NUP58-212ENST00000481980 TIGITQ495A1 244 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 UNQ9165/PRO28630Q6UXU0 137 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 RBPMS2Q6ZRY4 209 aaKnown RBP12.47□□□□□ -0.41
NUP58-212ENST00000481980 NARS2Q96I59 477 aaKnown RBP12.47□□□□□ -0.41
NUP58-212ENST00000481980 NPCDR1Q9BY65 106 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 WFDC1Q9HC57 220 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 TIMM9Q9Y5J7 89 aa12.47□□□□□ -0.41
NUP58-212ENST00000481980 CXorf65A6NEN9 183 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 LY6G6CO95867 125 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 TOMM40O96008 361 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 BAP18Q8IXM2 172 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 OR51G1Q8NGK1 321 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 STOML3Q8TAV4 291 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 GINS3Q9BRX5 216 aa12.46□□□□□ -0.41
NUP58-212ENST00000481980 PSMG3Q9BT73 122 aaPredicted RBP12.46□□□□□ -0.41
NUP58-212ENST00000481980 MRPL36Q9P0J6 103 aaKnown RBP12.46□□□□□ -0.41
NUP58-212ENST00000481980 MRPL27Q9P0M9 148 aaKnown RBP12.46□□□□□ -0.41
NUP58-212ENST00000481980 MBP02144 154 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 ELLP55199 621 aaPredicted RBP12.45□□□□□ -0.42
NUP58-212ENST00000481980 B2MP61769 119 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 PMS2P11Q13670 270 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 AKR1C8PQ5T2L2 129 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 PXDC1Q5TGL8 231 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 WFDC3Q8IUB2 231 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 MGST2Q99735 147 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 PBDC1Q9BVG4 233 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 RNF24Q9Y225 148 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 TP53TG1Q9Y2A0 90 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 UFC1Q9Y3C8 167 aa12.45□□□□□ -0.42
NUP58-212ENST00000481980 A0A0J9YWU9 116 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 COX7A2P2O60397 106 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 CTSGP08311 255 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 LINC00869P0C866 280 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 ATP6V0CP27449 155 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 BMI1P35226 326 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 RPL29P47914 159 aaKnown RBP12.44□□□□□ -0.42
NUP58-212ENST00000481980 APOC4P55056 127 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 LYZP61626 148 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 ACOT6Q3I5F7 207 aaPredicted RBP12.44□□□□□ -0.42
NUP58-212ENST00000481980 FFAR4Q5NUL3 377 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 LAMTOR1Q6IAA8 161 aa12.44□□□□□ -0.42
NUP58-212ENST00000481980 Q6ZWC4 215 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms