RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 IGHV3-74A0A0B4J1X5 117 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV4-28A0A0C4DH34 117 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 A0A0G2JRQ6 117 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 ANKRD20A5PA0PJZ0 165 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 KRTAP23-1A1A580 65 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 ISLRO14498 428 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IFNA10P01566 189 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV3-48P01763 117 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 RD3LP0DJH9 198 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 P0DMU3 169 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 FAM231AP0DMU4 169 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 FAM231CP0DMU5 169 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 C4BPBP20851 252 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 GPX4P36969 197 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-208ENST00000481484 ID1P41134 155 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 GALR1P47211 349 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 ALDH3B2P48448 385 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 NANOS2P60321 138 aaKnown RBP3.01□□□□□ -1.93
VPS13D-208ENST00000481484 RAB11AP62491 216 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 EWSR1Q01844 656 aaKnown RBP eCLIP3.01□□□□□ -1.93
VPS13D-208ENST00000481484 TIGITQ495A1 244 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 SPINK9Q5DT21 86 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 PSMG4Q5JS54 123 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 ACTL10Q5JWF8 245 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 LEMD1Q68G75 181 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 IGFL4Q6B9Z1 124 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 FOXI2Q6ZQN5 318 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 SELENOHQ8IZQ5 122 aaKnown RBP3.01□□□□□ -1.93
VPS13D-208ENST00000481484 OR4D10Q8NGI6 311 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 OR51S1Q8NGJ8 323 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 COQ8AQ8NI60 647 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 LHFPL5Q8TAF8 219 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 GLYATL2Q8WU03 294 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 DIRAS2Q96HU8 199 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 SLC25A21Q9BQT8 299 aaPredicted RBP3.01□□□□□ -1.93
VPS13D-208ENST00000481484 NDUFAF3Q9BU61 184 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 GPR132Q9UNW8 380 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 SELENOKQ9Y6D0 94 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 FAT2Q9NYQ8 4349 aa3.01□□□□□ -1.93
VPS13D-208ENST00000481484 DNAH11Q96DT5 4516 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV4-4A0A075B6R2 117 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 ZFP92A6NM28 416 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 BUB3O43684 328 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 APOHP02749 345 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 ETV6P41212 452 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 PAX9P55771 341 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 FAM3BP58499 235 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 B2MP61769 119 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 OXA1LQ15070 435 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 USF2Q15853 346 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 IZUMO4Q1ZYL8 232 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 SP6Q3SY56 376 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 GAGE13Q4V321 117 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 TMEM128Q5BJH2 165 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 GGNBP1Q5YKI7 109 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF705AQ6ZN79 300 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 LRTM2Q8N967 370 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 OR1S1Q8NH92 325 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 DYNC2LI1Q8TCX1 351 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 TRIM63Q969Q1 353 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 GPR146Q96CH1 333 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 ACY3Q96HD9 319 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 TRGV9Q99603 122 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 RTBDNQ9BSG5 229 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 MIXL1Q9H2W2 232 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 SAV1Q9H4B6 383 aaPredicted RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 MCUBQ9NWR8 336 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 MRPL36Q9P0J6 103 aaKnown RBP3□□□□□ -1.93
VPS13D-208ENST00000481484 GOLT1BQ9Y3E0 138 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 TMED3Q9Y3Q3 217 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 RFNGQ9Y644 331 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 DNAH17Q9UFH2 4485 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 RYR1P21817 5038 aa3□□□□□ -1.93
VPS13D-208ENST00000481484 DEFB131BA0A096LNP1 70 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 IGHV3-66A0A0C4DH42 116 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 NAP1L6A6NFF2 107 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 A8MTW9 85 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF705FA8MVS1 300 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SNRPGP15A8MWD9 76 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 IGLL5B9A064 214 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 FNDC10F2Z333 226 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 H3BMM0 161 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 H3BMQ9 156 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF701M0R085 212 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 DUSP14O95147 198 aaKnown RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 INSP01308 110 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 GIG44P09565 113 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF705DP0CH99 300 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF705BP0CI00 300 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SPART-AS1P0CW21 52 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 PSG1P11464 419 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 CXCL2P19875 107 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 HLA-DMBP28068 263 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 S100A5P33763 92 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 LYZP61626 148 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SELENOTP62341 195 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 AKR1C1Q04828 323 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 KLF9Q13886 244 aaPredicted RBP2.99□□□□□ -1.93
VPS13D-208ENST00000481484 SPCS2Q15005 226 aa2.99□□□□□ -1.93
VPS13D-208ENST00000481484 ZNF79Q15937 498 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 136.5 ms