RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 TMED6Q8WW62 240 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 ACY3Q96HD9 319 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 NPCDR1Q9BY65 106 aa9.25□□□□□ -0.93
PTPRF-213ENST00000481019 ZNF320A2RRD8 509 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 FOLR2P14207 255 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 GP9P14770 177 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 FCGR2BP31994 310 aaPredicted RBP9.24□□□□□ -0.93
PTPRF-213ENST00000481019 Q56UQ5 140 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 CLLU1Q5K131 121 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 PXDC1Q5TGL8 231 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 THAP8Q8NA92 274 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 NPIPB3Q92617 1050 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 TRGV9Q99603 122 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 SIGLEC8Q9NYZ4 499 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 MLXQ9UH92 298 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 RNF24Q9Y225 148 aa9.24□□□□□ -0.93
PTPRF-213ENST00000481019 ZNF705EA8MWA4 302 aaPredicted RBP9.23□□□□□ -0.93
PTPRF-213ENST00000481019 A8MWP6 167 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 AGPAT2O15120 278 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 ZNF207O43670 478 aaKnown RBP9.23□□□□□ -0.93
PTPRF-213ENST00000481019 GNG7O60262 68 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 CLN5O75503 358 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 CBLN1P23435 193 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 RND2P52198 227 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 DEFB114Q30KQ6 69 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 CD300EQ496F6 205 aaPredicted RBP9.23□□□□□ -0.93
PTPRF-213ENST00000481019 Q8N1Y9 231 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 RNF2Q99496 336 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 PEMTQ9UBM1 199 aa9.23□□□□□ -0.93
PTPRF-213ENST00000481019 DNAH7Q8WXX0 4024 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 ZNF785A8K8V0 405 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 HBE1P02100 147 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 M6PRP20645 277 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 OR10J1P30954 320 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 B2MP61769 119 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 FAM106AQ4KMX7 169 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 TMEM41BQ5BJD5 291 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 TMEM182Q6ZP80 229 aaPredicted RBP9.22□□□□□ -0.93
PTPRF-213ENST00000481019 BPIFCQ8NFQ6 507 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 OR1L4Q8NGR5 311 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 TMEM190Q8WZ59 177 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 PFDN5Q99471 154 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 RSG1Q9BU20 258 aa9.22□□□□□ -0.93
PTPRF-213ENST00000481019 ZMAT5Q9UDW3 170 aaKnown RBP9.22□□□□□ -0.93
PTPRF-213ENST00000481019 TENM3Q9P273 2699 aa9.21□□□□□ -0.93
PTPRF-213ENST00000481019 ELOA3CA0A087WX78 387 aaPredicted RBP9.21□□□□□ -0.94
PTPRF-213ENST00000481019 A0A1W2PPV4 95 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 NUPL2O15504 423 aaKnown RBP9.21□□□□□ -0.94
PTPRF-213ENST00000481019 C8orf88P0DMB2 117 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 FFAR4Q5NUL3 377 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 SPSB3Q6PJ21 355 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 CYP2G1PQ6ZSU1 146 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 Q8WTZ3 238 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 MGST2Q99735 147 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 GGTLC1Q9BX51 225 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 ACTR3CQ9C0K3 210 aaPredicted RBP9.21□□□□□ -0.94
PTPRF-213ENST00000481019 SLC39A9Q9NUM3 307 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 PFDN2Q9UHV9 154 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 SLC45A2Q9UMX9 530 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 PXMP4Q9Y6I8 212 aa9.21□□□□□ -0.94
PTPRF-213ENST00000481019 NDUFA4O00483 81 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 H2AFB1P0C5Y9 115 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 RD3LP0DJH9 198 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 YPEL3P61236 119 aaPredicted RBP9.2□□□□□ -0.94
PTPRF-213ENST00000481019 STPG3Q8N7X2 389 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 OR10G4Q8NGN3 311 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 OR10G9Q8NGN4 311 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 OR10G7Q8NGN6 311 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 GATAD1Q8WUU5 269 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 ASCL2Q99929 193 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 C20orf24Q9BUV8 137 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 SH3BGRL3Q9H299 93 aa9.2□□□□□ -0.94
PTPRF-213ENST00000481019 IGHV3-49A0A0A0MS15 119 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 TAS2R45P59539 299 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 RHOBP62745 196 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 PRR20EP86478 221 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 PRR20CP86479 221 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 PRR20DP86480 221 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 PRR20BP86481 221 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 PRR20AP86496 221 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 RELQ04864 619 aaPredicted RBP9.19□□□□□ -0.94
PTPRF-213ENST00000481019 TIGITQ495A1 244 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 TMEM61Q8N0U2 210 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 FAM213BQ8TBF2 198 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 DYNLRB2Q8TF09 96 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 B9D2Q9BPU9 175 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 WFDC10AQ9H1F0 79 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 DNAJC4Q9NNZ3 241 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 MED9Q9NWA0 146 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 UFC1Q9Y3C8 167 aa9.19□□□□□ -0.94
PTPRF-213ENST00000481019 CTXND1A0A1B0GTU2 59 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 TOMM40O96008 361 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 IGKV1-17P01599 117 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 APOHP02749 345 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-213ENST00000481019 NMBP08949 121 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 CD7P09564 240 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 IGLC1P0CG04 106 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 PPT1P50897 306 aa9.18□□□□□ -0.94
PTPRF-213ENST00000481019 ELLP55199 621 aaPredicted RBP9.18□□□□□ -0.94
PTPRF-213ENST00000481019 FAM74A1Q5RGS3 127 aa9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms