RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 VCXQ9H320 206 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 ENY2Q9NPA8 101 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 DIABLOQ9NR28 239 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 PLA2G2DQ9UNK4 145 aa6.67□□□□□ -1.34
GPNMB-211ENST00000479625 TRAV26-1A0A087WT03 109 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 CBY3A6NI87 242 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 A8MTW9 85 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 INSP01308 110 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 NAT1P18440 290 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 S100GP29377 79 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 SCAND1P57086 179 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 ERVFC1-1P60608 527 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 TMEM170AQ8WVE7 144 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 NPIPB3Q92617 1050 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 GNPNAT1Q96EK6 184 aaPredicted RBP6.66□□□□□ -1.34
GPNMB-211ENST00000479625 ABHD1Q96SE0 405 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 DOK5Q9P104 306 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 MRPS16Q9Y3D3 137 aaKnown RBP6.66□□□□□ -1.34
GPNMB-211ENST00000479625 TNFRSF18Q9Y5U5 241 aa6.66□□□□□ -1.34
GPNMB-211ENST00000479625 TRAV12-2A0A075B6T6 113 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 RD3LP0DJH9 198 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 PSMB9P28065 219 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 TSPOP30536 169 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 CNN1P51911 297 aaKnown RBP6.65□□□□□ -1.34
GPNMB-211ENST00000479625 TSPAN5P62079 268 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 OR5I1Q13606 314 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 SPATA31B1PQ5VZV4 182 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 LYSMD2Q8IV50 215 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 OR11H7Q8NGC8 314 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 RPRMQ9NS64 109 aa6.65□□□□□ -1.34
GPNMB-211ENST00000479625 PKHD1L1Q86WI1 4243 aa6.65□□□□□ -1.35
GPNMB-211ENST00000479625 ISLRO14498 428 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 IFNA5P01569 189 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 SLC25A4P12235 298 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 HTR2BP41595 481 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 ANKRD39Q53RE8 183 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 IGFL4Q6B9Z1 124 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 LPCAT3Q6P1A2 487 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 SLC24A4Q8NFF2 622 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 RXFP4Q8TDU9 374 aa6.64□□□□□ -1.35
GPNMB-211ENST00000479625 SLC25A39Q9BZJ4 359 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-211ENST00000479625 HEYLQ9NQ87 328 aaPredicted RBP6.64□□□□□ -1.35
GPNMB-211ENST00000479625 A0A087WTM6 91 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 ZNF701M0R085 212 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 PRB4P10163 310 aaPredicted RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 HTN1P15515 57 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 M6PRP20645 277 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 LYZP61626 148 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 SUPT4H1P63272 117 aaKnown RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 ZNF90Q03938 601 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 TRIM16LQ309B1 348 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 SP6Q3SY56 376 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 C2orf83Q53S99 150 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 RNASE11Q8TAA1 199 aaKnown RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 RNASEH2CQ8TDP1 164 aaKnown RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 NRG4Q8WWG1 115 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 C16orf92Q96LL3 132 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 KRTAP9-3Q9BYQ3 159 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 NOP10Q9NPE3 64 aaKnown RBP6.63□□□□□ -1.35
GPNMB-211ENST00000479625 SSR3Q9UNL2 185 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 RNF213Q63HN8 5207 aa6.63□□□□□ -1.35
GPNMB-211ENST00000479625 PGAM2P15259 253 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 NUP62P37198 522 aaPredicted RBP6.62□□□□□ -1.35
GPNMB-211ENST00000479625 UCP3P55916 312 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 PIGPP57054 158 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 SPCS3P61009 180 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 RND3P61587 244 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 RNASE12Q5GAN4 147 aaKnown RBP6.62□□□□□ -1.35
GPNMB-211ENST00000479625 OR8G2PQ6IF36 304 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 SPARTQ8N0X7 666 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 ARRDC1Q8N5I2 433 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 ZNF503Q96F45 646 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 C16orf74Q96GX8 76 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 CNBD2Q96M20 576 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 SLC25A32Q9H2D1 315 aa6.62□□□□□ -1.35
GPNMB-211ENST00000479625 IGKV1D-37A0A075B6S9 117 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 LOC100506127A0A0U1RQW1 187 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 C3orf85A0A1B0GTC6 90 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 KRTAP29-1A8MX34 341 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 BOLA2-SMG1P6H3BVE0 249 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 PLA2G1BP04054 148 aaKnown RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 GCSHP23434 173 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 PRSS3P35030 304 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 OR2F1Q13607 317 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 UBE2NLQ5JXB2 153 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 OR8I2Q8N0Y5 310 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 RNF182Q8N6D2 247 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 RNASE8Q8TDE3 154 aaKnown RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 PPP1R14BQ96C90 147 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 RRNAD1Q96FB5 475 aaKnown RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 S100A16Q96FQ6 103 aaKnown RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 LINC01587Q99440 93 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 BLOC1S6Q9UL45 172 aa6.61□□□□□ -1.35
GPNMB-211ENST00000479625 TIMM8BQ9Y5J9 83 aaPredicted RBP6.61□□□□□ -1.35
GPNMB-211ENST00000479625 TRAV8-2A0A0B4J237 113 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 GAGE12BA1L429 117 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 ZFP92A6NM28 416 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 CEBPZOSA8MTT3 80 aa6.6□□□□□ -1.35
GPNMB-211ENST00000479625 SIVA1O15304 175 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms