RNA–Protein interactions for RNA: ENST00000479320.5

HLA-A-206, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,334 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-206ENST00000479320 Q6ZRM9 215 aa13.28□□□□□ -0.28
HLA-A-206ENST00000479320 RNASE11Q8TAA1 199 aaKnown RBP13.28□□□□□ -0.28
HLA-A-206ENST00000479320 TMED6Q8WW62 240 aa13.28□□□□□ -0.28
HLA-A-206ENST00000479320 FAM110AQ9BQ89 295 aa13.28□□□□□ -0.28
HLA-A-206ENST00000479320 NAA60Q9H7X0 242 aa13.28□□□□□ -0.28
HLA-A-206ENST00000479320 HOXB5P09067 269 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 HOXA5P20719 270 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 PPT1P50897 306 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 PVRIGQ6DKI7 326 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 ZFAND6Q6FIF0 208 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 ZFP82Q8N141 532 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 OR10C1Q96KK4 312 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 SMPXQ9UHP9 88 aa13.27□□□□□ -0.29
HLA-A-206ENST00000479320 CSMD3Q7Z407 3707 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 ELOA3CA0A087WX78 387 aaPredicted RBP13.26□□□□□ -0.29
HLA-A-206ENST00000479320 C5orf51A6NDU8 294 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 CRYM-AS1A6NIL9 109 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 GNG7O60262 68 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 CLN5O75503 358 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 YIF1AO95070 293 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 RNASE2P10153 161 aaKnown RBP13.26□□□□□ -0.29
HLA-A-206ENST00000479320 FAM219AQ8IW50 185 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 SELENOHQ8IZQ5 122 aaKnown RBP13.26□□□□□ -0.29
HLA-A-206ENST00000479320 C2orf50Q96LR7 162 aa13.26□□□□□ -0.29
HLA-A-206ENST00000479320 STRAPQ9Y3F4 350 aaKnown RBP13.26□□□□□ -0.29
HLA-A-206ENST00000479320 DYNC2H1Q8NCM8 4307 aaKnown RBP13.26□□□□□ -0.29
HLA-A-206ENST00000479320 IGHV7-4-1A0A0J9YVY3 117 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 SFT2D2O95562 160 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 SUB1P53999 127 aaKnown RBP eCLIP13.25□□□□□ -0.29
HLA-A-206ENST00000479320 SRSF3P84103 164 aaKnown RBP13.25□□□□□ -0.29
HLA-A-206ENST00000479320 AKR1C1Q04828 323 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 AARDQ4LEZ3 155 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM268Q5VZI3 342 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 PBDC1Q9BVG4 233 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 GGTLC1Q9BX51 225 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 ARV1Q9H2C2 271 aa13.25□□□□□ -0.29
HLA-A-206ENST00000479320 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.25□□□□□ -0.29
HLA-A-206ENST00000479320 LOC102724200A0A096LPH7 203 aaPredicted RBP13.24□□□□□ -0.29
HLA-A-206ENST00000479320 IGHV3-49A0A0A0MS15 119 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 CHEK1O14757 476 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 MED6O75586 246 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 S100A2P29034 98 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 LRRC37A5PQ49AS3 106 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM116Q8NCL8 245 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 GPR146Q96CH1 333 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 PFDN5Q99471 154 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 RNF2Q99496 336 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 GGACTQ9BVM4 153 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 RHPN1-AS1Q9BWJ2 59 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 HRH4Q9H3N8 390 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 ENY2Q9NPA8 101 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 RPS10P5Q9NQ39 176 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 STARD9Q9P2P6 4700 aa13.24□□□□□ -0.29
HLA-A-206ENST00000479320 C7orf77A4D0Y5 90 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 CORTO00230 105 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 CCSO14618 274 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM50AO95807 157 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 SEC11BP0C7V7 166 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 SPCS3P61009 180 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 IL15RAQ13261 267 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 MLANAQ16655 118 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 BSXQ3C1V8 233 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 TOMM20LQ6UXN7 152 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 LILRB2Q8N423 598 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 OR52E5Q8NH55 327 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM56-RWDD3S4R434 201 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 TENM2Q9NT68 2774 aa13.23□□□□□ -0.29
HLA-A-206ENST00000479320 A0A087WWC5 75 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 CXorf65A6NEN9 183 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 OR4C46A6NHA9 309 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 ODF3L2Q3SX64 289 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM230Q96A57 120 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 FNDC4Q9H6D8 234 aaPredicted RBP13.22□□□□□ -0.29
HLA-A-206ENST00000479320 MRPL36Q9P0J6 103 aaKnown RBP13.22□□□□□ -0.29
HLA-A-206ENST00000479320 CACNG5Q9UF02 275 aa13.22□□□□□ -0.29
HLA-A-206ENST00000479320 IGHV3OR16-13A0A075B7E8 117 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 IGHV3-74A0A0B4J1X5 117 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 GPX4P36969 197 aaPredicted RBP13.21□□□□□ -0.29
HLA-A-206ENST00000479320 TMEM187Q14656 261 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 GALNT14Q96FL9 552 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 PRR13Q9NZ81 148 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 KCNIP3Q9Y2W7 256 aa13.21□□□□□ -0.29
HLA-A-206ENST00000479320 H0YIZ8 118 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 BTF3P20290 206 aaKnown RBP13.2□□□□□ -0.3
HLA-A-206ENST00000479320 VAMP1P23763 118 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 OPRK1P41145 380 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 PKIAP61925 76 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 FAM90A2PQ658T7 463 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 IL22RA2Q969J5 263 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 OVOL2Q9BRP0 275 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 GINS3Q9BRX5 216 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 TMEM231Q9H6L2 316 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 HEYLQ9NQ87 328 aaPredicted RBP13.2□□□□□ -0.3
HLA-A-206ENST00000479320 PUS1Q9Y606 427 aaKnown RBP eCLIP13.2□□□□□ -0.3
HLA-A-206ENST00000479320 RYR2Q92736 4967 aa13.2□□□□□ -0.3
HLA-A-206ENST00000479320 BORCS7-ASMTA0A0B4J1R7 106 aa13.19□□□□□ -0.3
HLA-A-206ENST00000479320 A0A1B0GU03 582 aa13.19□□□□□ -0.3
HLA-A-206ENST00000479320 APOHP02749 345 aaPredicted RBP13.19□□□□□ -0.3
HLA-A-206ENST00000479320 AKR1C4P17516 323 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms