RNA–Protein interactions for RNA: ENST00000478896.2

VCL-205, Transcript of vinculin, humanhuman

TSL 5

Gene VCL, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-205ENST00000478896 SPATA31B1PQ5VZV4 182 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 LYZL2Q7Z4W2 148 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 GPR141Q7Z602 305 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 FAM210BQ96KR6 192 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 RABL2AQ9UBK7 228 aaPredicted RBP9.45□□□□□ -0.9
VCL-205ENST00000478896 RABL2BQ9UNT1 228 aa9.45□□□□□ -0.9
VCL-205ENST00000478896 YTHDF2Q9Y5A9 579 aaKnown RBP9.45□□□□□ -0.9
VCL-205ENST00000478896 IGKV1D-37A0A075B6S9 117 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 LOC102723971A0A1B0GUV8 181 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 ANKRD20A5PA0PJZ0 165 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 F6UB75 175 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 ISLRO14498 428 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 SOCS3O14543 225 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 GPX4P36969 197 aaPredicted RBP9.44□□□□□ -0.9
VCL-205ENST00000478896 ATP5IP56385 69 aaPredicted RBP9.44□□□□□ -0.9
VCL-205ENST00000478896 SPCS2Q15005 226 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 RRN3P1Q2M238 152 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 SOHLH1Q5JUK2 328 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 FAM78BQ5VT40 261 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 SAMD13Q5VXD3 122 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 GSG1LQ6UXU4 331 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 C16orf92Q96LL3 132 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 TMEM208Q9BTX3 173 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 MAGT1Q9H0U3 335 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 RPRMQ9NS64 109 aa9.44□□□□□ -0.9
VCL-205ENST00000478896 PIGBOS1A0A0B4J2F0 54 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 IAPPP10997 89 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 GALR1P47211 349 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 MEOX2P50222 304 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 PAX9P55771 341 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 DAD1P61803 113 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 ZNF79Q15937 498 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 CLUHP3Q96NS8 147 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 TRGV9Q99603 122 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 MRPS26Q9BYN8 205 aaKnown RBP9.43□□□□□ -0.9
VCL-205ENST00000478896 SLC25A22Q9H936 323 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 PLA2G2EQ9NZK7 142 aa9.43□□□□□ -0.9
VCL-205ENST00000478896 A0A0J9YX75 114 aa9.42□□□□□ -0.9
VCL-205ENST00000478896 TMED4Q7Z7H5 227 aa9.42□□□□□ -0.9
VCL-205ENST00000478896 C1orf158Q8N1D5 194 aa9.42□□□□□ -0.9
VCL-205ENST00000478896 DOK5Q9P104 306 aa9.42□□□□□ -0.9
VCL-205ENST00000478896 DUXBA0A1W2PPF3 345 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 OXA1LQ15070 435 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 RNF212Q495C1 297 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 GGNBP1Q5YKI7 109 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 TMEM88Q6PEY1 159 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 SLC25A32Q9H2D1 315 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 CCDC59Q9P031 241 aaKnown RBP9.41□□□□□ -0.9
VCL-205ENST00000478896 RSL24D1Q9UHA3 163 aaKnown RBP9.41□□□□□ -0.9
VCL-205ENST00000478896 TMED3Q9Y3Q3 217 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 NACAE9PAV3 2078 aa9.41□□□□□ -0.9
VCL-205ENST00000478896 MED6O75586 246 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 CFDP00746 253 aaPredicted RBP9.4□□□□□ -0.9
VCL-205ENST00000478896 VAMP1P23763 118 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 FAUP35544 74 aaKnown RBP9.4□□□□□ -0.9
VCL-205ENST00000478896 RPP30P78346 268 aaKnown RBP9.4□□□□□ -0.9
VCL-205ENST00000478896 C1orf134Q5TEV5 83 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 Q6ZR54 194 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 THAP8Q8NA92 274 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 C20orf173Q96LM9 149 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 ATG101Q9BSB4 218 aa9.4□□□□□ -0.9
VCL-205ENST00000478896 IGKV1OR2-108A0A075B7D4 117 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 ZNF98A6NK75 572 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 INSP01308 110 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 ORM2P19652 201 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 S100A7P31151 101 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 AKR1C1Q04828 323 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 FGL1Q08830 312 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 ZNF575Q86XF7 245 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 C15orf53Q8NAA6 179 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 BPIFCQ8NFQ6 507 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 OR1B1Q8NGR6 318 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 RAB2BQ8WUD1 216 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 IGF2BP2-AS1Q96M15 143 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 CIB3Q96Q77 187 aaPredicted RBP9.39□□□□□ -0.91
VCL-205ENST00000478896 RSG1Q9BU20 258 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 TMEM147Q9BVK8 224 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 FAT2Q9NYQ8 4349 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 MUC4Q99102 2169 aa9.39□□□□□ -0.91
VCL-205ENST00000478896 DNAH2Q9P225 4427 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 FABP12A6NFH5 140 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 WRBO00258 174 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 NOL3O60936 208 aaKnown RBP9.38□□□□□ -0.91
VCL-205ENST00000478896 PITX3O75364 302 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 ALDH3B2P48448 385 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 SPINK13Q1W4C9 94 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 TMEM128Q5BJH2 165 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 DYNC2LI1Q8TCX1 351 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 GPR82Q96P67 336 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 SLC45A2Q9UMX9 530 aa9.38□□□□□ -0.91
VCL-205ENST00000478896 PKHD1P08F94 4074 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 ZNF705GA8MUZ8 300 aaPredicted RBP9.37□□□□□ -0.91
VCL-205ENST00000478896 M0R2Z0 102 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 DUSP14O95147 198 aaKnown RBP9.37□□□□□ -0.91
VCL-205ENST00000478896 SLC25A6P12236 298 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 GATA2P23769 480 aaPredicted RBP9.37□□□□□ -0.91
VCL-205ENST00000478896 CNN1P51911 297 aaKnown RBP9.37□□□□□ -0.91
VCL-205ENST00000478896 AP3S2P59780 193 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 SPANXN5Q5MJ07 72 aa9.37□□□□□ -0.91
VCL-205ENST00000478896 AMTNQ6UX39 209 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 124.2 ms