RNA–Protein interactions for RNA: ENST00000478746.1

VIM-204, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 757 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-204ENST00000478746 PAX9P55771 341 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 CLINT1Q14677 625 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 SP6Q3SY56 376 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 RNASE10Q5GAN6 216 aaKnown RBP12.01□□□□□ -0.49
VIM-204ENST00000478746 LHFPL1Q86WI0 220 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 SMIM4Q8WVI0 70 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 ACY3Q96HD9 319 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 Q9H8V8 135 aa12.01□□□□□ -0.49
VIM-204ENST00000478746 ZNF705GA8MUZ8 300 aaPredicted RBP12□□□□□ -0.49
VIM-204ENST00000478746 PRM2P04554 102 aa12□□□□□ -0.49
VIM-204ENST00000478746 UCP1P25874 307 aa12□□□□□ -0.49
VIM-204ENST00000478746 ARRDC1Q8N5I2 433 aa12□□□□□ -0.49
VIM-204ENST00000478746 CCDC71LQ8N9Z2 235 aa12□□□□□ -0.49
VIM-204ENST00000478746 OR52E5Q8NH55 327 aa12□□□□□ -0.49
VIM-204ENST00000478746 ZFAND1Q8TCF1 268 aa12□□□□□ -0.49
VIM-204ENST00000478746 S100ZQ8WXG8 99 aa12□□□□□ -0.49
VIM-204ENST00000478746 RNF125Q96EQ8 232 aa12□□□□□ -0.49
VIM-204ENST00000478746 IGF2BP2-AS1Q96M15 143 aa12□□□□□ -0.49
VIM-204ENST00000478746 PBDC1Q9BVG4 233 aa12□□□□□ -0.49
VIM-204ENST00000478746 CTNNBIP1Q9NSA3 81 aaPredicted RBP12□□□□□ -0.49
VIM-204ENST00000478746 MTFP1Q9UDX5 166 aa12□□□□□ -0.49
VIM-204ENST00000478746 A0A0J9YX75 114 aa11.99□□□□□ -0.49
VIM-204ENST00000478746 SOCS3O14543 225 aa11.99□□□□□ -0.49
VIM-204ENST00000478746 SSBP1Q04837 148 aaKnown RBP11.99□□□□□ -0.49
VIM-204ENST00000478746 AARDQ4LEZ3 155 aa11.99□□□□□ -0.49
VIM-204ENST00000478746 SSX7Q7RTT5 188 aa11.99□□□□□ -0.49
VIM-204ENST00000478746 FAM219AQ8IW50 185 aa11.99□□□□□ -0.49
VIM-204ENST00000478746 ISLRO14498 428 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 B3GALNT1O75752 331 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 CD3DP04234 171 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 ATP5G1P05496 136 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 BTF3P20290 206 aaKnown RBP11.98□□□□□ -0.49
VIM-204ENST00000478746 ATP5G3P48201 142 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 FCN2Q15485 313 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 OR8G2PQ6IF36 304 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 SLC24A4Q8NFF2 622 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 RPRMQ9NS64 109 aa11.98□□□□□ -0.49
VIM-204ENST00000478746 CEBPZOSA8MTT3 80 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 TTC32Q5I0X7 151 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 C1orf194Q5T5A4 169 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 NOXA1Q86UR1 476 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 RNF141Q8WVD5 230 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 TMEM170AQ8WVE7 144 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 GPR146Q96CH1 333 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 SRRQ9GZT4 340 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 DOK5Q9P104 306 aa11.97□□□□□ -0.49
VIM-204ENST00000478746 CBY3A6NI87 242 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 TBPP20226 339 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 INPP1P49441 399 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 TAS2R19P59542 299 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 SUPT4H1P63272 117 aaKnown RBP11.96□□□□□ -0.49
VIM-204ENST00000478746 DLK1P80370 383 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 TMEM229BQ8NBD8 167 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 OR4C16Q8NGL9 310 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 OR13C8Q8NGS7 320 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 TERB2Q8NHR7 220 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 TMEM222Q9H0R3 208 aa11.96□□□□□ -0.49
VIM-204ENST00000478746 A8MTW9 85 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 CDS2O95674 445 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 TSPOP30536 169 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 B2MP61769 119 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 KLF9Q13886 244 aaPredicted RBP11.95□□□□□ -0.5
VIM-204ENST00000478746 ZNF846Q147U1 533 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 SCGB2B2Q4G0G5 96 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 TRIQKQ629K1 86 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 AMTNQ6UX39 209 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 OR8I2Q8N0Y5 310 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 MARCH1Q8TCQ1 289 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 C16orf92Q96LL3 132 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 KRTAP1-5Q9BYS1 174 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 Q9H3A6 140 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 CACNG5Q9UF02 275 aa11.95□□□□□ -0.5
VIM-204ENST00000478746 RAB3DO95716 219 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 OR5AC1P0C628 307 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 AZU1P20160 251 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 AP3S2P59780 193 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 SAMD13Q5VXD3 122 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 STEAP1BQ6NZ63 245 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 LYPD1Q8N2G4 141 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 OR4D10Q8NGI6 311 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 GLYATL2Q8WU03 294 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 RBPMSQ93062 196 aaKnown RBP11.94□□□□□ -0.5
VIM-204ENST00000478746 TRIM63Q969Q1 353 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 PPP1R14BQ96C90 147 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 C20orf173Q96LM9 149 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 FAT1Q14517 4588 aa11.94□□□□□ -0.5
VIM-204ENST00000478746 ANKRD20A5PA0PJZ0 165 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 ZFP92A6NM28 416 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 M0R2Z0 102 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 INSP01308 110 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 AKAIN1P0CW23 69 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 LYZP61626 148 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 ZNF90Q03938 601 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 MEF2DQ14814 521 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 SPINK13Q1W4C9 94 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 SELENOHQ8IZQ5 122 aaKnown RBP11.93□□□□□ -0.5
VIM-204ENST00000478746 TOMM5Q8N4H5 51 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 LHFPL5Q8TAF8 219 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 UHRF2Q96PU4 802 aa11.93□□□□□ -0.5
VIM-204ENST00000478746 CCDC32Q9BV29 185 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms