RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 LINC00869P0C866 280 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPNP16150 400 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 PRKACBP22694 351 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 RCVRNP35243 200 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 HTR2BP41595 481 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 KIR3DL2P43630 455 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 INPP1P49441 399 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TAS2R46P59540 309 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 FGF12P61328 243 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 LSM3P62310 102 aaKnown RBP2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 CACNG7P62955 275 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 RBMY1FQ15415 496 aaKnown RBP2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ABCA11PQ4W5N1 156 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SPIN3Q5JUX0 258 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM201AQ5SY85 155 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ELP2Q6IA86 826 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 LAMTOR1Q6IAA8 161 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF826PQ6ZT77 177 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SSX6Q7RTT6 188 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR2W3Q7Z3T1 314 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 Q8N402 240 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 C9orf62Q8N4C0 152 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF561Q8N587 486 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SIGLECL1Q8N7X8 197 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ZNF680Q8NEM1 530 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR5H6Q8NGV6 325 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SGMS2Q8NHU3 365 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 BORCS8Q96FH0 119 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 FAM19A4Q96LR4 140 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SCGB3A2Q96PL1 93 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 RSG1Q9BU20 258 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TMEM243Q9BU79 118 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 GGTLC1Q9BX51 225 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TTTY10Q9BZA0 68 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ALX4Q9H161 411 aaPredicted RBP2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 MED28Q9H204 178 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 C8orf17Q9NRJ1 99 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 ABRACLQ9P1F3 81 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 HHLA2Q9UM44 414 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 SLC7A11Q9UPY5 501 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 TBL2Q9Y4P3 447 aaKnown RBP2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 OR51B2Q9Y5P1 312 aa2.34□□□□□ -2.03
CDC42BPA-212ENST00000478573 MUC19Q7Z5P9 8384 aa2.34□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGKV1D-17A0A075B6S4 117 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGHV3OR15-7A0A075B7D8 119 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGHV7-4-1A0A0J9YVY3 117 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CENPVL3A0A0U1RRI6 287 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 A0A1W2PRF3 423 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 A0A1W2PRM7 423 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR4C45A6NMZ5 311 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ARL6IP5O75915 188 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR2A4O95047 310 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CDRT1O95170 752 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CYB5AP00167 134 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 PAHP00439 452 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 IGHV3-11P01762 117 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CSN2P05814 226 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF688P0C7X2 276 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SULT1A3P0DMM9 295 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SULT1A4P0DMN0 295 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ATF1P18846 271 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 HAAOP46952 286 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 KCNJ3P48549 501 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 RBP2P50120 134 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 UBE2E1P51965 193 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 FLI1Q01543 452 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 RPL18AQ02543 176 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 MEF2CQ06413 473 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CDK5R1Q15078 307 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SLC9A3R2Q15599 337 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 DEFB112Q30KQ8 113 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 PYDC2Q56P42 97 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 RNASE13Q5GAN3 156 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 LPCAT3Q6P1A2 487 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 HAGHLQ6PII5 290 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ASCL4Q6XD76 172 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 VMO1Q7Z5L0 202 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 LINC00596Q86U02 117 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 LGI3Q8N145 548 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ACBD7Q8N6N7 88 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 FAM216BQ8N7L0 139 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 TMEM104Q8NE00 496 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 PXT1Q8NFP0 134 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF431Q8TF32 576 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 MITD1Q8WV92 249 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SMIM4Q8WVI0 70 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 H1FXQ92522 213 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 TNFRSF14Q92956 283 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 OR2A7Q96R45 310 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 TBX5Q99593 518 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 CCL13Q99616 98 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SEC22CQ9BRL7 303 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 ZNF436Q9C0F3 470 aaPredicted RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 METTL8Q9H825 291 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 WFDC1Q9HC57 220 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 EXOSC4Q9NPD3 245 aaKnown RBP2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 SIRT7Q9NRC8 400 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 TAS2R8Q9NYW2 309 aa2.33□□□□□ -2.04
CDC42BPA-212ENST00000478573 GNG8Q9UK08 70 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms