RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 A0A1W2PS18 150 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 IGSF23A1L1A6 192 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 OR4C46A6NHA9 309 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 OR11H12B2RN74 326 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 RLN2P04090 185 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 CYCSP99999 105 aaKnown RBP5.16□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM144Q7Z5S9 345 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 WFDC3Q8IUB2 231 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 STXBP6Q8NFX7 210 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 PPP1R1CQ8WVI7 109 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 PPP1R14BQ96C90 147 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 GRAMD2BQ96HH9 432 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 B9D2Q9BPU9 175 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 MED28Q9H204 178 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 C11orf1Q9H5F2 150 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 DOK5Q9P104 306 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 UBE2L5PA0A1B0GUS4 154 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 DNASE2O00115 360 aaPredicted RBP5.16□□□□□ -1.58
BRCA1-215ENST00000478531 PET100P0DJ07 73 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 ORM2P19652 201 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 CXCL3P19876 107 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 EIF2B2P49770 351 aaKnown RBP5.16□□□□□ -1.58
BRCA1-215ENST00000478531 SULT1A1P50225 295 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 TEPPQ6URK8 271 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 BPIFCQ8NFQ6 507 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 OR1B1Q8NGR6 318 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 MS4A6AQ9H2W1 248 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 SRD5A3Q9H8P0 318 aa5.16□□□□□ -1.58
BRCA1-215ENST00000478531 AGRNO00468 2067 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 E5RGE8 158 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 H0YIZ8 118 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 LINC00869P0C866 280 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 PAFAH1B2P68402 229 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 HBG1P69891 147 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 HBG2P69892 147 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 FCN2Q15485 313 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM182Q6ZP80 229 aaPredicted RBP5.15□□□□□ -1.58
BRCA1-215ENST00000478531 CYP2G1PQ6ZSU1 146 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 TMEM252Q8N6L7 170 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 SLC25A22Q9H936 323 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 NPVFQ9HCQ7 196 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 UQCC1Q9NVA1 299 aa5.15□□□□□ -1.58
BRCA1-215ENST00000478531 FNDC10F2Z333 226 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 MPC2O95563 127 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 CD5P06127 495 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 NUP62P37198 522 aaPredicted RBP5.15□□□□□ -1.59
BRCA1-215ENST00000478531 EWSR1Q01844 656 aaKnown RBP eCLIP5.15□□□□□ -1.59
BRCA1-215ENST00000478531 NHLH2Q02577 135 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 BAXQ07812 192 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 CLINT1Q14677 625 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 OXA1LQ15070 435 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 ODF3L2Q3SX64 289 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 FAM90A2PQ658T7 463 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 SIGLEC15Q6ZMC9 328 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 SBSPONQ8IVN8 264 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 OR11H7Q8NGC8 314 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 GLMPQ8WWB7 406 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 GGACTQ9BVM4 153 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 SLC25A31Q9H0C2 315 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 PGPEP1Q9NXJ5 209 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 MBD2Q9UBB5 411 aa5.15□□□□□ -1.59
BRCA1-215ENST00000478531 HELTA6NFD8 242 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 AGPAT2O15120 278 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 BUB3O43684 328 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 CFDP00746 253 aaPredicted RBP5.14□□□□□ -1.59
BRCA1-215ENST00000478531 S100A9P06702 114 aaKnown RBP5.14□□□□□ -1.59
BRCA1-215ENST00000478531 OR5G3P0C626 314 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 S100A11P31949 105 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 ZNF124Q15973 351 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 LEMD1Q68G75 181 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 ZNF546Q86UE3 836 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 APRG1Q8IVJ8 170 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 FAM24BQ8N5W8 94 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 OR5C1Q8NGR4 320 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 THAP6Q8TBB0 222 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 MGST2Q99735 147 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 TMEM147Q9BVK8 224 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 ARL6Q9H0F7 186 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 U3KQE9 123 aa5.14□□□□□ -1.59
BRCA1-215ENST00000478531 RBMY1BA6NDE4 496 aaKnown RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RBMY1EA6NEQ0 496 aaKnown RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RBMY1DP0C7P1 496 aaKnown RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 ZNF688P0C7X2 276 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 FGF7P21781 194 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 CAMLGP49069 296 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 SELENOTP62341 195 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 OR8I2Q8N0Y5 310 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 STPG3Q8N7X2 389 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 UHRF2Q96PU4 802 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 MAP6D1Q9H9H5 199 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 C19orf73Q9NVV2 129 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 HIGD1AQ9Y241 93 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 CSMD3Q7Z407 3707 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 A8MZ25 164 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 ATP6V1G1O75348 118 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 HYPMO75409 117 aa5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RPL35AP18077 110 aaKnown RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 RPL12P30050 165 aaKnown RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 AP2S1P53680 142 aaPredicted RBP5.13□□□□□ -1.59
BRCA1-215ENST00000478531 DEFB131AP59861 70 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms