RNA–Protein interactions for RNA: ENST00000478095.1

HDAC6-222, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-222ENST00000478095 ODF3L2Q3SX64 289 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 C16orf54Q6UWD8 224 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 SBSPONQ8IVN8 264 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 FAM24BQ8N5W8 94 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 STPG3Q8N7X2 389 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 BPIFCQ8NFQ6 507 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 STXBP6Q8NFX7 210 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 OR11H7Q8NGC8 314 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 OR1B1Q8NGR6 318 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 PPP1R14BQ96C90 147 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 MS4A6AQ9H2W1 248 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 NPVFQ9HCQ7 196 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 DOK5Q9P104 306 aa7.66□□□□□ -1.18
HDAC6-222ENST00000478095 UBE2L5PA0A1B0GUS4 154 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 FNDC10F2Z333 226 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 DNASE2O00115 360 aaPredicted RBP7.65□□□□□ -1.18
HDAC6-222ENST00000478095 BUB3O43684 328 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 LINC00869P0C866 280 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 PAFAH1B2P68402 229 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 HBG1P69891 147 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 HBG2P69892 147 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 EWSR1Q01844 656 aaKnown RBP eCLIP7.65□□□□□ -1.18
HDAC6-222ENST00000478095 NHLH2Q02577 135 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 ZNF124Q15973 351 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 TEPPQ6URK8 271 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 GLMPQ8WWB7 406 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 CITED4Q96RK1 184 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 MGST2Q99735 147 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 RNF126Q9BV68 326 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 TMEM147Q9BVK8 224 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 GGACTQ9BVM4 153 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 UQCC1Q9NVA1 299 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 MBD2Q9UBB5 411 aa7.65□□□□□ -1.18
HDAC6-222ENST00000478095 SORL1Q92673 2214 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 RBMY1BA6NDE4 496 aaKnown RBP7.64□□□□□ -1.19
HDAC6-222ENST00000478095 RBMY1EA6NEQ0 496 aaKnown RBP7.64□□□□□ -1.19
HDAC6-222ENST00000478095 A8MZ25 164 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 AGPAT2O15120 278 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 CFDP00746 253 aaPredicted RBP7.64□□□□□ -1.19
HDAC6-222ENST00000478095 CD5P06127 495 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 RBMY1DP0C7P1 496 aaKnown RBP7.64□□□□□ -1.19
HDAC6-222ENST00000478095 PET100P0DJ07 73 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 S100A11P31949 105 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 BAXQ07812 192 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 CLINT1Q14677 625 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 LEMD1Q68G75 181 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 SIGLEC15Q6ZMC9 328 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 APRG1Q8IVJ8 170 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 THAP6Q8TBB0 222 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 SLC25A31Q9H0C2 315 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 SLC25A22Q9H936 323 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 MAP6D1Q9H9H5 199 aa7.64□□□□□ -1.19
HDAC6-222ENST00000478095 HELTA6NFD8 242 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 OR5G3P0C626 314 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 FGF7P21781 194 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 NUP62P37198 522 aaPredicted RBP7.63□□□□□ -1.19
HDAC6-222ENST00000478095 CAMLGP49069 296 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 SELENOTP62341 195 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 VWC2Q2TAL6 325 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 ZNF546Q86UE3 836 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 OR5C1Q8NGR4 320 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 UHRF2Q96PU4 802 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 SCRT1Q9BWW7 348 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 GGTLC1Q9BX51 225 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 ARL6Q9H0F7 186 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 PFDN2Q9UHV9 154 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 SLC45A2Q9UMX9 530 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 WDR83OSQ9Y284 106 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 DNAH9Q9NYC9 4486 aa7.63□□□□□ -1.19
HDAC6-222ENST00000478095 SCO2A0A1W2PP80 73 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 K7EQG2 157 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 HYPMO75409 117 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 ZNF688P0C7X2 276 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 DEFB131AP59861 70 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 RAP2BP61225 183 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 HAGHQ16775 308 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 Q5BKY6 102 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 MIC13Q5XKP0 118 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 LINC00322Q6ZN03 302 aaPredicted RBP7.62□□□□□ -1.19
HDAC6-222ENST00000478095 OR8I2Q8N0Y5 310 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 DCANP1Q8TF63 244 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 SMIM3Q9BZL3 60 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 SLC25A32Q9H2D1 315 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 RETNQ9HD89 108 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 NRN1Q9NPD7 142 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 HIGD1AQ9Y241 93 aa7.62□□□□□ -1.19
HDAC6-222ENST00000478095 TRAV2A0A0B4J234 112 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 ZNF98A6NK75 572 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 H3BRN7 92 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 EIF4EBP3O60516 100 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 GIPP09681 153 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 NHLRC4P0CG21 123 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 RPL35AP18077 110 aaKnown RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 RPL12P30050 165 aaKnown RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 AP2S1P53680 142 aaPredicted RBP7.61□□□□□ -1.19
HDAC6-222ENST00000478095 PLP1P60201 277 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 RAB31Q13636 194 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 ATP6V1FQ16864 119 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 C1orf194Q5T5A4 169 aa7.61□□□□□ -1.19
HDAC6-222ENST00000478095 PATE2Q6UY27 113 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms