RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 CENPWQ5EE01 88 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 C9orf152Q5JTZ5 239 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 ETFRF1Q6IPR1 90 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 WDR73Q6P4I2 378 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 LYPD2Q6UXB3 125 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 MOB3BQ86TA1 216 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 MMD2Q8IY49 270 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 TEX45Q8NA69 505 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 OR10W1Q8NGF6 305 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 OR1L6Q8NGR2 347 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 C22orf15Q8WYQ4 148 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 CCL17Q92583 94 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 FAM167A-AS1Q96KT0 104 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 NOL4LQ96MY1 436 aaPredicted RBP3.96□□□□□ -1.78
SF3B6-202ENST00000478050 SLC25A33Q9BSK2 321 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 CHRDL1Q9BU40 450 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 DNAJC4Q9NNZ3 241 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 ZNRD1Q9P1U0 126 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 CTSZQ9UBR2 303 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 V9GYV3 84 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 ABCA4P78363 2273 aa3.96□□□□□ -1.78
SF3B6-202ENST00000478050 POLEQ07864 2286 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 IGHV1-69-2A0A0G2JMI3 117 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 A0A1W2PPI3 338 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 CGB1A6NKQ9 187 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 GGTLC3B5MD39 225 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 CORTO00230 105 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 ISLRO14498 428 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 FCN3O75636 299 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 RBP4P02753 201 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 IGHV1-8P0DP01 117 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 ESDP10768 282 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PAX1P15863 534 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 GATA2P23769 480 aaPredicted RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 DDTP30046 118 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 RPL27AP46776 148 aaKnown RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 REG1BP48304 166 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 COMPP49747 757 aaPredicted RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PPOXP50336 477 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PRRX1P54821 245 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 ERVFC1-1P60608 527 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 UBE2L3P68036 154 aaKnown RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PAFAH1B2P68402 229 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PAX2Q02962 417 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 WT1-ASQ06250 92 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 C10orf113Q5VZT2 155 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PVRIGQ6DKI7 326 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 ZCCHC24Q8N2G6 241 aaKnown RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 STXBP6Q8NFX7 210 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 OR5AU1Q8NGC0 362 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 OR2T6Q8NHC8 308 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM190Q8WZ59 177 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PERPQ96FX8 193 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 IGF2BP2-AS1Q96M15 143 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 WFIKKN1Q96NZ8 548 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 TRGV9Q99603 122 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 PAXXQ9BUH6 204 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 SLC25A2Q9BXI2 301 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 GNB1LQ9BYB4 327 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 TMEM133Q9H2Q1 129 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 FAM30AQ9NZY2 134 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 ZMAT5Q9UDW3 170 aaKnown RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 SH3BGRL2Q9UJC5 107 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 AMMECR1Q9Y4X0 333 aaPredicted RBP3.95□□□□□ -1.78
SF3B6-202ENST00000478050 TLN2Q9Y4G6 2542 aa3.95□□□□□ -1.78
SF3B6-202ENST00000478050 IGKV1D-37A0A075B6S9 117 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 ZNF705GA8MUZ8 300 aaPredicted RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 SNURFLB1AK76 121 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 E7EUB6 86 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 SLC17A3O00476 420 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 ENSAO43768 121 aaKnown RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 SLC25A17O43808 307 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 HLA-DQA1P01909 254 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CRYGCP07315 174 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CRYGBP07316 175 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 RD3LP0DJH9 198 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CRISP2P16562 243 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CBLN1P23435 193 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CASP6P55212 293 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 TPPP2P59282 170 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 RAB4BP61018 213 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 RANP62826 216 aaKnown RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CX3CL1P78423 397 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 Q0VG73 95 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 OR5I1Q13606 314 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 DIAPH2-AS1Q14236 149 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 PRSS8Q16651 343 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 FBXL19-AS1Q494R0 122 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 LBHQ53QV2 105 aaPredicted RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 IBA57Q5T440 356 aaKnown RBP3.94□□□□□ -1.78
SF3B6-202ENST00000478050 RASL11AQ6T310 242 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 FAM231DQ6ZW35 169 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 OR8I2Q8N0Y5 310 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 BEND2Q8NDZ0 799 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 CMTM2Q8TAZ6 248 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 NPIPB3Q92617 1050 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 SMIM12Q96EX1 92 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 C14orf144Q96I85 54 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 RNF5Q99942 180 aa3.94□□□□□ -1.78
SF3B6-202ENST00000478050 SRSF8Q9BRL6 282 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms