RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 MFAP2P55001 183 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 AKR1C1Q04828 323 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 EXOSC2Q13868 293 aaKnown RBP7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 ATP6V1FQ16864 119 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 TM4SF20Q53R12 229 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 PVRIGQ6DKI7 326 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 C19orf35Q6ZS72 473 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 TTC9CQ8N5M4 171 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 STPG3Q8N7X2 389 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 SLC35E1Q96K37 410 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 TMEM68Q96MH6 324 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 WFDC1Q9HC57 220 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 CYTL1Q9NRR1 136 aa7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 TECRQ9NZ01 308 aaKnown RBP7.15□□□□□ -1.26
SMARCB1-206ENST00000477836 C2orf70A6NJV1 201 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 FNDC10F2Z333 226 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 HIST1H1BP16401 226 aaKnown RBP7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 VWC2Q2TAL6 325 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 TMEM61Q8N0U2 210 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 UBAC2Q8NBM4 344 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 SCGB1C1Q8TD33 95 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 ST8SIA2Q92186 375 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 THYN1Q9P016 225 aa7.14□□□□□ -1.27
SMARCB1-206ENST00000477836 IGLV11-55A0A075B6I3 123 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 BMPR1BO00238 502 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 MPDU1O75352 247 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 MT-CO2P00403 227 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 PRH1P02810 166 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 GPX4P36969 197 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 ETFRF1Q6IPR1 90 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 EIF5AL1Q6IS14 154 aaKnown RBP7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 BAP18Q8IXM2 172 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 POM121L12Q8N7R1 296 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 HSD17B11Q8NBQ5 300 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 CACNG8Q8WXS5 425 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 GNPNAT1Q96EK6 184 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 PHYHIPLQ96FC7 376 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 ACY3Q96HD9 319 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 PARD6GQ9BYG4 376 aaPredicted RBP7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 KCNIP2Q9NS61 270 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 WDR83OSQ9Y284 106 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 DMRT1Q9Y5R6 373 aa7.13□□□□□ -1.27
SMARCB1-206ENST00000477836 SRRM2Q9UQ35 2752 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 IGHV4-4A0A075B6R2 117 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 KIR2DL5BA0A0G2JN68 375 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 KIR2DL5BA0A0G2JPC4 375 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 OR2J3O76001 311 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 IFNA7P01567 189 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 RPL35AP18077 110 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 FGF7P21781 194 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 FCGR2BP31994 310 aaPredicted RBP7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 RND2P52198 227 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 LGALS9BQ3B8N2 356 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 TEX261Q6UWH6 196 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 BTNL8Q6UX41 500 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 KIR2DL5AQ8N109 375 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 KIR2DL5BQ8NHK3 375 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 USMG5Q96IX5 58 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 RARRES2Q99969 163 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 GINS3Q9BRX5 216 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 WDR61Q9GZS3 305 aaKnown RBP7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 ARV1Q9H2C2 271 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 UBQLN2Q9UHD9 624 aa7.12□□□□□ -1.27
SMARCB1-206ENST00000477836 FAT1Q14517 4588 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 VPS13BQ7Z7G8 4022 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 IGHV3-21A0A0B4J1V1 117 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 FAM223BA6NKX1 122 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 C11orf94C9JXX5 98 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 C17orf112F2Z3M2 114 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 I3L2K1 104 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 K7EIM0 57 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 DEFB4AO15263 64 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 SCGB2A1O75556 95 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 CBLN1P23435 193 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 ATP6V0CP27449 155 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 RHOGP84095 191 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 RAB31Q13636 194 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 GAMTQ14353 236 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 SOHLH1Q5JUK2 328 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 TEPPQ6URK8 271 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 ALKAL2Q6UX46 152 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 ZNF767PQ75MW2 155 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 TMEM144Q7Z5S9 345 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 FAM223AQ8IWN6 122 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 ZNF709Q8N972 641 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 NECAP1Q8NC96 275 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 TMED6Q8WW62 240 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 FANCD2OSQ96PS1 177 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 NPCDR1Q9BY65 106 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 SH3BGRL3Q9H299 93 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 SLC25A32Q9H2D1 315 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 C11orf68Q9H3H3 251 aaKnown RBP7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 FNDC4Q9H6D8 234 aaPredicted RBP7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 NPVFQ9HCQ7 196 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 MLXQ9UH92 298 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 TIMM9Q9Y5J7 89 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 HMCN2Q8NDA2 5059 aa7.11□□□□□ -1.27
SMARCB1-206ENST00000477836 IGLV2-18A0A075B6J9 118 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 ZFP92A6NM28 416 aa7.1□□□□□ -1.27
SMARCB1-206ENST00000477836 RGS13O14921 159 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms