RNA–Protein interactions for RNA: ENST00000477596.1

SF1-214, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 802 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-214ENST00000477596 NUP62P37198 522 aaPredicted RBP16.47■□□□□ 0.23
SF1-214ENST00000477596 APOC4P55056 127 aa16.47■□□□□ 0.23
SF1-214ENST00000477596 DEFB135Q30KP9 77 aa16.47■□□□□ 0.23
SF1-214ENST00000477596 OR1B1Q8NGR6 318 aa16.47■□□□□ 0.23
SF1-214ENST00000477596 NRN1Q9NPD7 142 aa16.47■□□□□ 0.23
SF1-214ENST00000477596 AGRNO00468 2067 aa16.47■□□□□ 0.23
SF1-214ENST00000477596 KNCNA6PVL3 124 aa16.46■□□□□ 0.23
SF1-214ENST00000477596 FNDC10F2Z333 226 aa16.46■□□□□ 0.23
SF1-214ENST00000477596 TMEM217Q8N7C4 229 aa16.46■□□□□ 0.23
SF1-214ENST00000477596 LYRM2Q9NU23 88 aaPredicted RBP16.46■□□□□ 0.23
SF1-214ENST00000477596 CFDP00746 253 aaPredicted RBP16.45■□□□□ 0.22
SF1-214ENST00000477596 LINC00869P0C866 280 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 PVALBP20472 110 aaPredicted RBP16.45■□□□□ 0.22
SF1-214ENST00000477596 AP2S1P53680 142 aaPredicted RBP16.45■□□□□ 0.22
SF1-214ENST00000477596 LRRC37A5PQ49AS3 106 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 PSMG4Q5JS54 123 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 SLC25A32Q9H2D1 315 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 SLC25A22Q9H936 323 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 NPVFQ9HCQ7 196 aa16.45■□□□□ 0.22
SF1-214ENST00000477596 KIR2DL5BA0A0G2JN68 375 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 KIR2DL5BA0A0G2JPC4 375 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 SSNA1O43805 119 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 DEDDO75618 318 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 H2BFSP57053 126 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 KIR2DL5AQ8N109 375 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 TMEM252Q8N6L7 170 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 KIR2DL5BQ8NHK3 375 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 MUC7Q8TAX7 377 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 TMEM147Q9BVK8 224 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 SCRT1Q9BWW7 348 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 PFDN2Q9UHV9 154 aa16.44■□□□□ 0.22
SF1-214ENST00000477596 ZNF98A6NK75 572 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 C1orf194Q5T5A4 169 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 TEPPQ6URK8 271 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 OR8I2Q8N0Y5 310 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 MGST2Q99735 147 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 GGACTQ9BVM4 153 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 OR5AC2Q9NZP5 309 aa16.43■□□□□ 0.22
SF1-214ENST00000477596 H0YIZ8 118 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 SULT1A1P50225 295 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 Q6ZWC4 215 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 UHRF2Q96PU4 802 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 NMES1Q9C002 83 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 FBXL17Q9UF56 701 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 SLC45A2Q9UMX9 530 aa16.42■□□□□ 0.22
SF1-214ENST00000477596 H3BRN7 92 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 UBE2CO00762 179 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 SOCS3O14543 225 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 AGPAT2O15120 278 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 DEFB1P60022 68 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 ACTL10Q5JWF8 245 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 STHQ8IWL8 128 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 C17orf77Q96MU5 243 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 CSTL1Q9H114 145 aa16.41■□□□□ 0.22
SF1-214ENST00000477596 KMT2CQ8NEZ4 4911 aaKnown RBP16.41■□□□□ 0.22
SF1-214ENST00000477596 SPRY2O43597 315 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 PTTG1O95997 202 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 OR5G3P0C626 314 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 PLP1P60201 277 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 SELENOTP62341 195 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 TRPT1Q86TN4 253 aaKnown RBP16.4■□□□□ 0.22
SF1-214ENST00000477596 RNF183Q96D59 192 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 SLC25A39Q9BZJ4 359 aaPredicted RBP16.4■□□□□ 0.22
SF1-214ENST00000477596 ARL6Q9H0F7 186 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 UQCC1Q9NVA1 299 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 HIGD1AQ9Y241 93 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 ALG5Q9Y673 324 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 STARD9Q9P2P6 4700 aa16.4■□□□□ 0.22
SF1-214ENST00000477596 UBE2L5PA0A1B0GUS4 154 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 HYPMO75409 117 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 CA1P00915 261 aaPredicted RBP16.39■□□□□ 0.21
SF1-214ENST00000477596 SNRPD3P62318 126 aaKnown RBP16.39■□□□□ 0.21
SF1-214ENST00000477596 PATE2Q6UY27 113 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 ZNF546Q86UE3 836 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 STX12Q86Y82 276 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 SHANK2-AS3Q9BTD1 123 aa16.39■□□□□ 0.21
SF1-214ENST00000477596 RAP2BP61225 183 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 VWC2Q2TAL6 325 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 ZFAND6Q6FIF0 208 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 PPP1R1CQ8WVI7 109 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 WDR83OSQ9Y284 106 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 TP53TG1Q9Y2A0 90 aa16.38■□□□□ 0.21
SF1-214ENST00000477596 C3orf84H3BNL1 204 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 C4BPBP20851 252 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 GALR1P47211 349 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 EWSR1Q01844 656 aaKnown RBP eCLIP16.37■□□□□ 0.213e-6■□□□□ 9.5
SF1-214ENST00000477596 NHLH2Q02577 135 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 LINC00052Q96N35 136 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 RSG1Q9BU20 258 aa16.37■□□□□ 0.21
SF1-214ENST00000477596 CSMD3Q7Z407 3707 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 E5RGE8 158 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 GIG44P09565 113 aaPredicted RBP16.36■□□□□ 0.21
SF1-214ENST00000477596 S100A11P31949 105 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 CAMLGP49069 296 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 CYCSP99999 105 aaKnown RBP16.36■□□□□ 0.21
SF1-214ENST00000477596 GDF5OSQ5U4N7 250 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 MIC13Q5XKP0 118 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 ARV1Q9H2C2 271 aa16.36■□□□□ 0.21
SF1-214ENST00000477596 SEPSECSQ9HD40 501 aaKnown RBP16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms