RNA–Protein interactions for RNA: ENST00000477299.5

COPS3-207, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 5

Gene COPS3, Length 656 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-207ENST00000477299 LEMD1Q68G75 181 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 C16orf54Q6UWD8 224 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 TCF24Q7RTU0 167 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 GBGT1Q8N5D6 347 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 UHRF2Q96PU4 802 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 NPCDR1Q9BY65 106 aa11.91□□□□□ -0.5
COPS3-207ENST00000477299 WDR61Q9GZS3 305 aaKnown RBP11.91□□□□□ -0.5
COPS3-207ENST00000477299 TFPI2P48307 235 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 PRR20EP86478 221 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 PRR20CP86479 221 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 PRR20DP86480 221 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 PRR20BP86481 221 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 PRR20AP86496 221 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 GCSAMLQ5JQS6 135 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 Q8N1Y9 231 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 GLMPQ8WWB7 406 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 TMEM37Q8WXS4 190 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 RSG1Q9BU20 258 aa11.9□□□□□ -0.5
COPS3-207ENST00000477299 CD7P09564 240 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 OR5G3P0C626 314 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 PLP1P60201 277 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 SELENOTP62341 195 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 MORN5Q5VZ52 161 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 LCN12Q6JVE5 192 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 RBPMS2Q6ZRY4 209 aaKnown RBP11.89□□□□□ -0.51
COPS3-207ENST00000477299 WFDC3Q8IUB2 231 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 NEURL2Q9BR09 285 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 SCRT1Q9BWW7 348 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 PXMP4Q9Y6I8 212 aa11.89□□□□□ -0.51
COPS3-207ENST00000477299 HYPMO75409 117 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 CXCL2P19875 107 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 NUP62P37198 522 aaPredicted RBP11.88□□□□□ -0.51
COPS3-207ENST00000477299 RPL29P47914 159 aaKnown RBP11.88□□□□□ -0.51
COPS3-207ENST00000477299 FAM24BQ8N5W8 94 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 INO80EQ8NBZ0 244 aaPredicted RBP11.88□□□□□ -0.51
COPS3-207ENST00000477299 OR2K2Q8NGT1 345 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 PPP1R14BQ96C90 147 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 C17orf77Q96MU5 243 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 SLC25A39Q9BZJ4 359 aaPredicted RBP11.88□□□□□ -0.51
COPS3-207ENST00000477299 MFFQ9GZY8 342 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 WFDC10AQ9H1F0 79 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 SLC39A9Q9NUM3 307 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 AGRNO00468 2067 aa11.88□□□□□ -0.51
COPS3-207ENST00000477299 A0A1W2PS18 150 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 ZNF98A6NK75 572 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 TSPAN4O14817 238 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 CFDP00746 253 aaPredicted RBP11.87□□□□□ -0.51
COPS3-207ENST00000477299 B2MP61769 119 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 RPL11P62913 178 aaKnown RBP11.87□□□□□ -0.51
COPS3-207ENST00000477299 RAB31Q13636 194 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 RPL7L1Q6DKI1 246 aaKnown RBP11.87□□□□□ -0.51
COPS3-207ENST00000477299 TCTE3Q8IZS6 198 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 ARV1Q9H2C2 271 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 SLC25A32Q9H2D1 315 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 MS4A6AQ9H2W1 248 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 SLC25A22Q9H936 323 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 HIGD1AQ9Y241 93 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 SMAD5-AS1Q9Y6J3 95 aa11.87□□□□□ -0.51
COPS3-207ENST00000477299 TRAV5A0A0B4J249 113 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 TRAV25A0A0B4J276 109 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 H3BRN7 92 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 EIF3GO75821 320 aaKnown RBP eCLIP11.86□□□□□ -0.51
COPS3-207ENST00000477299 IFNA5P01569 189 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 SNRPCP09234 159 aaKnown RBP11.86□□□□□ -0.51
COPS3-207ENST00000477299 LAMTOR1Q6IAA8 161 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 AKAP14Q86UN6 197 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 SHANK2-AS3Q9BTD1 123 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 CYTL1Q9NRR1 136 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 UBQLN2Q9UHD9 624 aa11.86□□□□□ -0.51
COPS3-207ENST00000477299 HMSDA8MTL9 139 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 MPDU1O75352 247 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 ZNF124Q15973 351 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 SPATA31B1PQ5VZV4 182 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 SIGLEC15Q6ZMC9 328 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 LINC00305Q7Z4B0 112 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 HSD17B11Q8NBQ5 300 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 STXBP6Q8NFX7 210 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 SCGB1C1Q8TD33 95 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 GRAMD2BQ96HH9 432 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 NARS2Q96I59 477 aaKnown RBP11.85□□□□□ -0.51
COPS3-207ENST00000477299 TMEM231Q9H6L2 316 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 DNAJC4Q9NNZ3 241 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
COPS3-207ENST00000477299 COX7A2P2O60397 106 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 CD81P60033 236 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 DEFB121Q5J5C9 76 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 C10orf113Q5VZT2 155 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 Q6ZRG5 221 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 OR8I2Q8N0Y5 310 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 KCNRGQ8N5I3 272 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 SPAG8Q99932 426 aaPredicted RBP11.84□□□□□ -0.51
COPS3-207ENST00000477299 SH3BGRL3Q9H299 93 aa11.84□□□□□ -0.51
COPS3-207ENST00000477299 K7EQG2 157 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 ATP6V0CP27449 155 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 ODF3L2Q3SX64 289 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 LGALSLQ3ZCW2 172 aaPredicted RBP11.83□□□□□ -0.52
COPS3-207ENST00000477299 FFAR4Q5NUL3 377 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 DEFB125Q8N687 156 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 ZNF709Q8N972 641 aa11.83□□□□□ -0.52
COPS3-207ENST00000477299 DCANP1Q8TF63 244 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 146.1 ms