RNA–Protein interactions for RNA: ENST00000476428.1

MAP1LC3A-204, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 5

Gene MAP1LC3A, Length 851 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-204ENST00000476428 CXCL3P19876 107 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 S100A11P31949 105 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 NUP62P37198 522 aaPredicted RBP15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 AP2S1P53680 142 aaPredicted RBP15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SELENOTP62341 195 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 FAM24BQ8N5W8 94 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 PPP1R14BQ96C90 147 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 RYR3Q15413 4870 aa15.58■□□□□ 0.08
MAP1LC3A-204ENST00000476428 MPC2O95563 127 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OXA1LQ15070 435 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 FCN2Q15485 313 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SIGLEC15Q6ZMC9 328 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 APRG1Q8IVJ8 170 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OR1B1Q8NGR6 318 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 DCANP1Q8TF63 244 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 TM2D3Q9BRN9 247 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 MED28Q9H204 178 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 MAP6D1Q9H9H5 199 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 UQCC1Q9NVA1 299 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SLC45A2Q9UMX9 530 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 U3KQK5 164 aa15.57■□□□□ 0.08
MAP1LC3A-204ENST00000476428 AGPAT2O15120 278 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 LINC00869P0C866 280 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 PLP1P60201 277 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 HBG1P69891 147 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 HBG2P69892 147 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 NHLH2Q02577 135 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ZNF124Q15973 351 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 VWC2Q2TAL6 325 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 C1orf194Q5T5A4 169 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 MGST2Q99735 147 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 TMEM147Q9BVK8 224 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SLC25A31Q9H0C2 315 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 DOK5Q9P104 306 aa15.56■□□□□ 0.08
MAP1LC3A-204ENST00000476428 LOC102724200A0A096LPH7 203 aaPredicted RBP15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 DEFB131AP59861 70 aa15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 EWSR1Q01844 656 aaKnown RBP eCLIP15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ATP6V1FQ16864 119 aa15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OR11H7Q8NGC8 314 aa15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ZMAT4Q9H898 229 aa15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 WDR83OSQ9Y284 106 aa15.55■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ZNF98A6NK75 572 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 HYPMO75409 117 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ZNF546Q86UE3 836 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OR8I2Q8N0Y5 310 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 GGTLC1Q9BX51 225 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 FBXL17Q9UF56 701 aa15.54■□□□□ 0.08
MAP1LC3A-204ENST00000476428 CAMLGP49069 296 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 PATE2Q6UY27 113 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ARL6Q9H0F7 186 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 NRN1Q9NPD7 142 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 HIGD1AQ9Y241 93 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 COL7A1Q02388 2944 aa15.53■□□□□ 0.08
MAP1LC3A-204ENST00000476428 UBE2L5PA0A1B0GUS4 154 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OR5G3P0C626 314 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 ZNF688P0C7X2 276 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 PET100P0DJ07 73 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 RAP2BP61225 183 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 RAB31Q13636 194 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 LEMD1Q68G75 181 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 OR5C1Q8NGR4 320 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 RCHY1Q96PM5 261 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SPATA25Q9BR10 227 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SLC25A39Q9BZJ4 359 aaPredicted RBP15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SLC25A32Q9H2D1 315 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 SLC25A22Q9H936 323 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 MBD2Q9UBB5 411 aa15.52■□□□□ 0.08
MAP1LC3A-204ENST00000476428 TENM3Q9P273 2699 aa15.52■□□□□ 0.07
MAP1LC3A-204ENST00000476428 H3BRN7 92 aa15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 RPL35AP18077 110 aaKnown RBP15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 S100A7P31151 101 aa15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 BAXQ07812 192 aa15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 SHANK2-AS3Q9BTD1 123 aa15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 SCRT1Q9BWW7 348 aa15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 HUWE1Q7Z6Z7 4374 aaKnown RBP15.51■□□□□ 0.07
MAP1LC3A-204ENST00000476428 LYL1P12980 280 aa15.5■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PXDC1Q5TGL8 231 aa15.5■□□□□ 0.07
MAP1LC3A-204ENST00000476428 MIC13Q5XKP0 118 aa15.5■□□□□ 0.07
MAP1LC3A-204ENST00000476428 UHRF2Q96PU4 802 aa15.5■□□□□ 0.07
MAP1LC3A-204ENST00000476428 ARV1Q9H2C2 271 aa15.5■□□□□ 0.07
MAP1LC3A-204ENST00000476428 FGF7P21781 194 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PRR20EP86478 221 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PRR20CP86479 221 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PRR20DP86480 221 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PRR20BP86481 221 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PRR20AP86496 221 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 CLINT1Q14677 625 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 CHAC2Q8WUX2 184 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 SEPSECSQ9HD40 501 aaKnown RBP15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 RETNQ9HD89 108 aa15.49■□□□□ 0.07
MAP1LC3A-204ENST00000476428 RPL12P30050 165 aaKnown RBP15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 GALR1P47211 349 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 RPL29P47914 159 aaKnown RBP15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 OPCMLQ14982 345 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 PSMG4Q5JS54 123 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 THAP6Q8TBB0 222 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 C17orf77Q96MU5 243 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 RSG1Q9BU20 258 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 HSPB11Q9Y547 144 aa15.48■□□□□ 0.07
MAP1LC3A-204ENST00000476428 APOC4P55056 127 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms