RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 ZNF266Q14584 549 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 PXDC1Q5TGL8 231 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 KCNRGQ8N5I3 272 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 OR1B1Q8NGR6 318 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 SCGB1C1Q8TD33 95 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 NARS2Q96I59 477 aaKnown RBP16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 ARL6Q9H0F7 186 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 SLC39A9Q9NUM3 307 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 DOK5Q9P104 306 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 PXMP4Q9Y6I8 212 aa16.73■□□□□ 0.27
MCF2L2-209ENST00000475664 IZUMO1RA6ND01 250 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 BUB3O43684 328 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 HYPMO75409 117 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 CXCL2P19875 107 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 B2MP61769 119 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 TMEM61Q8N0U2 210 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 RNF2Q99496 336 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 TMEM231Q9H6L2 316 aa16.72■□□□□ 0.27
MCF2L2-209ENST00000475664 NBEAL1Q6ZS30 2694 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 KRTAP10-11P60412 298 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 LCN12Q6JVE5 192 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 C16orf54Q6UWD8 224 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 PATE2Q6UY27 113 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 ZNF709Q8N972 641 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 RSG1Q9BU20 258 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 KCNIP2Q9NS61 270 aa16.71■□□□□ 0.27
MCF2L2-209ENST00000475664 NOTCH1P46531 2555 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 A0A0D9SG52 128 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 C17orf112F2Z3M2 114 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 TAAR5O14804 337 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 OR5G3P0C626 314 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 FAM90A2PQ658T7 463 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 RPL7L1Q6DKI1 246 aaKnown RBP16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 Q6ZRG5 221 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 GLMPQ8WWB7 406 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 GRAMD2BQ96HH9 432 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 PFDN2Q9UHV9 154 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 HIGD1AQ9Y241 93 aa16.7■□□□□ 0.26
MCF2L2-209ENST00000475664 TRAV25A0A0B4J276 109 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 H3BRN7 92 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 TMEM37Q8WXS4 190 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 PPP1R14BQ96C90 147 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 HYLS1Q96M11 299 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 ARV1Q9H2C2 271 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 CYTL1Q9NRR1 136 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 SORL1Q92673 2214 aa16.69■□□□□ 0.26
MCF2L2-209ENST00000475664 COX7A2P2O60397 106 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 LAMTOR1Q6IAA8 161 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 TCF24Q7RTU0 167 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 UHRF2Q96PU4 802 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 ARPC5LQ9BPX5 153 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 SHANK2-AS3Q9BTD1 123 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 SLC25A39Q9BZJ4 359 aaPredicted RBP16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 ZMAT5Q9UDW3 170 aaKnown RBP16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 TIMM9Q9Y5J7 89 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 DNAH3Q8TD57 4116 aa16.68■□□□□ 0.26
MCF2L2-209ENST00000475664 ELOA3CA0A087WX78 387 aaPredicted RBP16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 BORCS7-ASMTA0A0B4J1R7 106 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 ZNF98A6NK75 572 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 ZNF785A8K8V0 405 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 TSPAN4O14817 238 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 CD5P06127 495 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 S100A7P31151 101 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 ZFP69Q49AA0 526 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 C1orf194Q5T5A4 169 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 RBPMS2Q6ZRY4 209 aaKnown RBP16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 HSD17B11Q8NBQ5 300 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 OR1L4Q8NGR5 311 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 SCRT1Q9BWW7 348 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 DNAJC4Q9NNZ3 241 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 ZNF256Q9Y2P7 627 aaPredicted RBP16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 RFNGQ9Y644 331 aa16.67■□□□□ 0.26
MCF2L2-209ENST00000475664 LGALSLQ3ZCW2 172 aaPredicted RBP16.66■□□□□ 0.26
MCF2L2-209ENST00000475664 C10orf113Q5VZT2 155 aa16.66■□□□□ 0.26
MCF2L2-209ENST00000475664 PFDN5Q99471 154 aa16.66■□□□□ 0.26
MCF2L2-209ENST00000475664 BCL2L11O43521 198 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 JTBO76095 146 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 ATP6V0CP27449 155 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 GUCA2BQ16661 112 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 GCSAMLQ5JQS6 135 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 TMUB2Q71RG4 321 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 LINC00305Q7Z4B0 112 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 S100A7AQ86SG5 101 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 GATAD1Q8WUU5 269 aa16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 SPAG8Q99932 426 aaPredicted RBP16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 PSMG3Q9BT73 122 aaPredicted RBP16.65■□□□□ 0.26
MCF2L2-209ENST00000475664 KANTRA0A1W2PQU2 76 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 HELTA6NFD8 242 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 GP9P14770 177 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 FFAR4Q5NUL3 377 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 LEMD1Q68G75 181 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 SIGLEC15Q6ZMC9 328 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 SLC25A32Q9H2D1 315 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 SLC25A22Q9H936 323 aa16.64■□□□□ 0.25
MCF2L2-209ENST00000475664 MORN5Q5VZ52 161 aa16.63■□□□□ 0.25
MCF2L2-209ENST00000475664 OR8I2Q8N0Y5 310 aa16.63■□□□□ 0.25
MCF2L2-209ENST00000475664 OR2G3Q8NGZ4 309 aa16.63■□□□□ 0.25
MCF2L2-209ENST00000475664 SH3BGRL3Q9H299 93 aa16.63■□□□□ 0.25
MCF2L2-209ENST00000475664 IGKV3-7A0A075B6H7 116 aa16.62■□□□□ 0.25
MCF2L2-209ENST00000475664 PFDN1O60925 122 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms