RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 NAT8BQ9UHF3 227 aa2.56□□□□□ -2
SMC5-203ENST00000475540 RIMBP3CA6NJZ7 1639 aa2.56□□□□□ -2
SMC5-203ENST00000475540 RIMBP3BA6NNM3 1639 aa2.56□□□□□ -2
SMC5-203ENST00000475540 RIMBP3Q9UFD9 1639 aa2.56□□□□□ -2
SMC5-203ENST00000475540 MYH7BA7E2Y1 1941 aa2.56□□□□□ -2
SMC5-203ENST00000475540 TMSB15BA0A087X1C1 80 aa2.55□□□□□ -2
SMC5-203ENST00000475540 ODAMA1E959 279 aa2.55□□□□□ -2
SMC5-203ENST00000475540 TMEM189A5PLL7 270 aa2.55□□□□□ -2
SMC5-203ENST00000475540 OBSL1O75147 1896 aa2.55□□□□□ -2
SMC5-203ENST00000475540 CXCL1P09341 107 aa2.55□□□□□ -2
SMC5-203ENST00000475540 CRYGAP11844 174 aa2.55□□□□□ -2
SMC5-203ENST00000475540 TMBIM6P55061 237 aa2.55□□□□□ -2
SMC5-203ENST00000475540 ARPP19P56211 112 aa2.55□□□□□ -2
SMC5-203ENST00000475540 NDUFA6P56556 154 aa2.55□□□□□ -2
SMC5-203ENST00000475540 RELAQ04206 551 aa2.55□□□□□ -2
SMC5-203ENST00000475540 SLC30A7Q8NEW0 376 aa2.55□□□□□ -2
SMC5-203ENST00000475540 AQP3Q92482 292 aa2.55□□□□□ -2
SMC5-203ENST00000475540 LINC00467Q9BRT7 94 aa2.55□□□□□ -2
SMC5-203ENST00000475540 HS3ST2Q9Y278 367 aa2.55□□□□□ -2
SMC5-203ENST00000475540 TRAPPC8Q9Y2L5 1435 aa2.55□□□□□ -2
SMC5-203ENST00000475540 DOCK4Q8N1I0 1966 aa2.54□□□□□ -2
SMC5-203ENST00000475540 NUP210LQ5VU65 1888 aa2.54□□□□□ -2
SMC5-203ENST00000475540 PIK3C2AO00443 1686 aa2.54□□□□□ -2
SMC5-203ENST00000475540 CEP164Q9UPV0 1460 aa2.54□□□□□ -2
SMC5-203ENST00000475540 FNDC10F2Z333 226 aa2.54□□□□□ -2
SMC5-203ENST00000475540 HIST1H2BKO60814 126 aa2.54□□□□□ -2
SMC5-203ENST00000475540 IFNA4P05014 189 aa2.54□□□□□ -2
SMC5-203ENST00000475540 HIST1H2BJP06899 126 aa2.54□□□□□ -2
SMC5-203ENST00000475540 CSRP1P21291 193 aaKnown RBP2.54□□□□□ -2
SMC5-203ENST00000475540 RPL35P42766 123 aaKnown RBP2.54□□□□□ -2
SMC5-203ENST00000475540 DYNLT1P63172 113 aa2.54□□□□□ -2
SMC5-203ENST00000475540 HBBP68871 147 aa2.54□□□□□ -2
SMC5-203ENST00000475540 MSMO1Q15800 293 aa2.54□□□□□ -2
SMC5-203ENST00000475540 ZNF791Q3KP31 576 aaPredicted RBP2.54□□□□□ -2
SMC5-203ENST00000475540 CCDC58Q4VC31 144 aa2.54□□□□□ -2
SMC5-203ENST00000475540 SOSTDC1Q6X4U4 206 aa2.54□□□□□ -2
SMC5-203ENST00000475540 OR8I2Q8N0Y5 310 aa2.54□□□□□ -2
SMC5-203ENST00000475540 LXNQ9BS40 222 aa2.54□□□□□ -2
SMC5-203ENST00000475540 PRO2289Q9P1D8 64 aa2.54□□□□□ -2
SMC5-203ENST00000475540 OVOS2A0A0G2JMS6 1433 aa2.53□□□□□ -2
SMC5-203ENST00000475540 LYZL6O75951 148 aa2.53□□□□□ -2
SMC5-203ENST00000475540 NAPSAO96009 420 aa2.53□□□□□ -2
SMC5-203ENST00000475540 PMP2P02689 132 aa2.53□□□□□ -2
SMC5-203ENST00000475540 SHBGP04278 402 aa2.53□□□□□ -2
SMC5-203ENST00000475540 PEBP1P30086 187 aaKnown RBP2.53□□□□□ -2
SMC5-203ENST00000475540 SDC2P34741 201 aa2.53□□□□□ -2
SMC5-203ENST00000475540 AKR1C3P42330 323 aa2.53□□□□□ -2
SMC5-203ENST00000475540 CKS1BP61024 79 aa2.53□□□□□ -2
SMC5-203ENST00000475540 PSPHP78330 225 aa2.53□□□□□ -2
SMC5-203ENST00000475540 NNATQ16517 81 aa2.53□□□□□ -2
SMC5-203ENST00000475540 SMIM21Q3B7S5 101 aa2.53□□□□□ -2
SMC5-203ENST00000475540 SPANXN5Q5MJ07 72 aa2.53□□□□□ -2
SMC5-203ENST00000475540 Q6ZQT0 140 aa2.53□□□□□ -2
SMC5-203ENST00000475540 PHF5AQ7RTV0 110 aaKnown RBP2.53□□□□□ -2
SMC5-203ENST00000475540 OR5D16Q8NGK9 328 aa2.53□□□□□ -2
SMC5-203ENST00000475540 ZNF714Q96N38 554 aa2.53□□□□□ -2
SMC5-203ENST00000475540 BCL2L10Q9HD36 194 aa2.53□□□□□ -2
SMC5-203ENST00000475540 RNF11Q9Y3C5 154 aa2.53□□□□□ -2
SMC5-203ENST00000475540 ARHGEF28Q8N1W1 1705 aaKnown RBP2.53□□□□□ -2
SMC5-203ENST00000475540 CCDC88AQ3V6T2 1871 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 MALRD1Q5VYJ5 2156 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 IGHV1-58A0A0C4DH39 117 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 A8MWV9 139 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 FABP2P12104 132 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 ZNF345Q14585 488 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 SS18Q15532 418 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 VMA21Q3ZAQ7 101 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 Q6ZTI0 123 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 C3orf56Q8N813 242 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 OR8B3Q8NGG8 313 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 TSC22D3Q99576 134 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 CACYBPQ9HB71 228 aaKnown RBP2.52□□□□□ -2.01
SMC5-203ENST00000475540 TAS2R4Q9NYW5 299 aa2.52□□□□□ -2.01
SMC5-203ENST00000475540 VIRMAQ69YN4 1812 aaKnown RBP2.52□□□□□ -2.01
SMC5-203ENST00000475540 MED23Q9ULK4 1368 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 TRBV7-6A0A0J9YX20 115 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 J3QQQ9 107 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 TIMM17BO60830 172 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 DPM2O94777 84 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 CTSDP07339 412 aaPredicted RBP2.51□□□□□ -2.01
SMC5-203ENST00000475540 SCTP09683 121 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 P0DMU3 169 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 FAM231AP0DMU4 169 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 FAM231CP0DMU5 169 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 CMPK1P30085 196 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 AQP4P55087 323 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 RPL26P61254 145 aaKnown RBP2.51□□□□□ -2.01
SMC5-203ENST00000475540 SLC38A11Q08AI6 406 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 MORN2Q502X0 79 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 ZNF826PQ6ZT77 177 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 LINC00471Q8N535 108 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 COPZ2Q9P299 210 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 HSPB8Q9UJY1 196 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 PAIP2BQ9ULR5 123 aaKnown RBP2.51□□□□□ -2.01
SMC5-203ENST00000475540 RPL26L1Q9UNX3 145 aaKnown RBP2.51□□□□□ -2.01
SMC5-203ENST00000475540 PEG3Q9GZU2 1588 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 ARHGAP32A7KAX9 2087 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 A2MP01023 1474 aa2.51□□□□□ -2.01
SMC5-203ENST00000475540 TRPM1Q7Z4N2 1603 aa2.5□□□□□ -2.01
SMC5-203ENST00000475540 NUP210Q8TEM1 1887 aaPredicted RBP2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms