RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 TOMM40O96008 361 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 MBPP02686 304 aaPredicted RBP10.28□□□□□ -0.76
ATG9A-220ENST00000475339 CD5P06127 495 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 S100A10P60903 97 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 RPL11P62913 178 aaKnown RBP10.28□□□□□ -0.76
ATG9A-220ENST00000475339 OR8G2PQ6IF36 304 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 TCF24Q7RTU0 167 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 ST8SIA2Q92186 375 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 GRAMD2BQ96HH9 432 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 SMIM8Q96KF7 97 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 C2orf50Q96LR7 162 aa10.28□□□□□ -0.76
ATG9A-220ENST00000475339 RCL1Q9Y2P8 373 aaKnown RBP10.28□□□□□ -0.76
ATG9A-220ENST00000475339 LSM5Q9Y4Y9 91 aaKnown RBP10.28□□□□□ -0.76
ATG9A-220ENST00000475339 IGKV3-7A0A075B6H7 116 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 SNRPGP15A8MWD9 76 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 TSC22D2O75157 780 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 HNRNPCP07910 306 aaKnown RBP eCLIP10.27□□□□□ -0.77
ATG9A-220ENST00000475339 PVALBP20472 110 aaPredicted RBP10.27□□□□□ -0.77
ATG9A-220ENST00000475339 TAS2R30P59541 319 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 PAFAH1B2P68402 229 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 ACOT7LQ6ZUV0 252 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 STPG3Q8N7X2 389 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 OR51G1Q8NGK1 321 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 PBDC1Q9BVG4 233 aa10.27□□□□□ -0.77
ATG9A-220ENST00000475339 DNAH5Q8TE73 4624 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 GOSR2O14653 212 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 SSNA1O43805 119 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 APOHP02749 345 aaPredicted RBP10.26□□□□□ -0.77
ATG9A-220ENST00000475339 METTL15P1P0C7V9 234 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 PSG1P11464 419 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 CRYBB3P26998 211 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 NUP62P37198 522 aaPredicted RBP10.26□□□□□ -0.77
ATG9A-220ENST00000475339 TFPI2P48307 235 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 EIF2B2P49770 351 aaKnown RBP10.26□□□□□ -0.77
ATG9A-220ENST00000475339 BCAP31P51572 246 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 MARVELD1Q9BSK0 173 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 VSIRQ9H7M9 311 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 MGAT4CQ9UBM8 478 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 PFDN2Q9UHV9 154 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 RABAC1Q9UI14 185 aa10.26□□□□□ -0.77
ATG9A-220ENST00000475339 PRSS46E5RG02 174 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 K7EPK0 472 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 DNASE2O00115 360 aaPredicted RBP10.25□□□□□ -0.77
ATG9A-220ENST00000475339 DFFBO76075 338 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 P2RY1P47900 373 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 CAV2P51636 162 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 LYZP61626 148 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 ZNF90Q03938 601 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 OR2F1Q13607 317 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 GBGT1Q8N5D6 347 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 POM121L12Q8N7R1 296 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 OR10P1Q8NGE3 313 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 RNF125Q96EQ8 232 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 TRGV9Q99603 122 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 UBQLN2Q9UHD9 624 aa10.25□□□□□ -0.77
ATG9A-220ENST00000475339 SRRM2Q9UQ35 2752 aaKnown RBP10.25□□□□□ -0.77
ATG9A-220ENST00000475339 IGKV1D-37A0A075B6S9 117 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 KIR2DL5BA0A0G2JN68 375 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 KIR2DL5BA0A0G2JPC4 375 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 C7orf66A4D0T2 115 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 PTTG1O95997 202 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 RPL35AP18077 110 aaKnown RBP10.24□□□□□ -0.77
ATG9A-220ENST00000475339 PAX9P55771 341 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 RRAS2P62070 204 aaPredicted RBP10.24□□□□□ -0.77
ATG9A-220ENST00000475339 USF2Q15853 346 aaPredicted RBP10.24□□□□□ -0.77
ATG9A-220ENST00000475339 LGALS9BQ3B8N2 356 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 TMEM14EPQ6UXP3 125 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 KIR2DL5AQ8N109 375 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 THAP8Q8NA92 274 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 KIR2DL5BQ8NHK3 375 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 PPP1R14BQ96C90 147 aa10.24□□□□□ -0.77
ATG9A-220ENST00000475339 HELTA6NFD8 242 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 DEFB4AO15263 64 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 CFDP00746 253 aaPredicted RBP10.23□□□□□ -0.77
ATG9A-220ENST00000475339 CMC4P56277 68 aaPredicted RBP10.23□□□□□ -0.77
ATG9A-220ENST00000475339 DLK1P80370 383 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 FAM90A2PQ658T7 463 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 BPIFCQ8NFQ6 507 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 STXBP6Q8NFX7 210 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 RARRES2Q99969 163 aa10.23□□□□□ -0.77
ATG9A-220ENST00000475339 IGHV4-4A0A075B6R2 117 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 CCNKO75909 580 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 SIX6O95475 246 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 CYCSP99999 105 aaKnown RBP10.22□□□□□ -0.77
ATG9A-220ENST00000475339 RAB32Q13637 225 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 TMEM144Q7Z5S9 345 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 STX12Q86Y82 276 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 LILRB2Q8N423 598 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 MS4A6AQ9H2W1 248 aa10.22□□□□□ -0.77
ATG9A-220ENST00000475339 C11orf68Q9H3H3 251 aaKnown RBP10.22□□□□□ -0.77
ATG9A-220ENST00000475339 IGKV1OR2-108A0A075B7D4 117 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 TRAV2A0A0B4J234 112 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 PMS2P5A8MQ11 134 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 C11orf94C9JXX5 98 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 FNDC10F2Z333 226 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 RLN2P04090 185 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 S100A7P31151 101 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 AP2S1P53680 142 aaPredicted RBP10.21□□□□□ -0.77
ATG9A-220ENST00000475339 ODF3L2Q3SX64 289 aa10.21□□□□□ -0.77
ATG9A-220ENST00000475339 LRRC37A5PQ49AS3 106 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms