RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 F6UB75 175 aa8.83□□□□□ -1
SKA3-206ENST00000475251 DUSP14O95147 198 aaKnown RBP8.83□□□□□ -1
SKA3-206ENST00000475251 CD3DP04234 171 aa8.83□□□□□ -1
SKA3-206ENST00000475251 DEFB130BP0DP73 79 aa8.83□□□□□ -1
SKA3-206ENST00000475251 DEFB130AP0DP74 79 aa8.83□□□□□ -1
SKA3-206ENST00000475251 BTF3P20290 206 aaKnown RBP8.83□□□□□ -1
SKA3-206ENST00000475251 GALR1P47211 349 aa8.83□□□□□ -1
SKA3-206ENST00000475251 ATP5IP56385 69 aaPredicted RBP8.83□□□□□ -1
SKA3-206ENST00000475251 SCGB2B2Q4G0G5 96 aa8.83□□□□□ -1
SKA3-206ENST00000475251 C15orf40Q8WUR7 153 aa8.83□□□□□ -1
SKA3-206ENST00000475251 TMEM170AQ8WVE7 144 aa8.83□□□□□ -1
SKA3-206ENST00000475251 VCX3AQ9NNX9 186 aa8.83□□□□□ -1
SKA3-206ENST00000475251 LINC00588Q9Y4M8 146 aa8.83□□□□□ -1
SKA3-206ENST00000475251 A8MTW9 85 aa8.82□□□□□ -1
SKA3-206ENST00000475251 EPM2AB3EWF7 344 aa8.82□□□□□ -1
SKA3-206ENST00000475251 SULT1A3P0DMM9 295 aa8.82□□□□□ -1
SKA3-206ENST00000475251 SULT1A4P0DMN0 295 aa8.82□□□□□ -1
SKA3-206ENST00000475251 ELK1P19419 428 aa8.82□□□□□ -1
SKA3-206ENST00000475251 S100A7P31151 101 aa8.82□□□□□ -1
SKA3-206ENST00000475251 GPX4P36969 197 aaPredicted RBP8.82□□□□□ -1
SKA3-206ENST00000475251 TAS2R19P59542 299 aa8.82□□□□□ -1
SKA3-206ENST00000475251 LYZP61626 148 aa8.82□□□□□ -1
SKA3-206ENST00000475251 LSM3P62310 102 aaKnown RBP8.82□□□□□ -1
SKA3-206ENST00000475251 GPR141Q7Z602 305 aa8.82□□□□□ -1
SKA3-206ENST00000475251 MARCH1Q8TCQ1 289 aa8.82□□□□□ -1
SKA3-206ENST00000475251 GLYATL2Q8WU03 294 aa8.82□□□□□ -1
SKA3-206ENST00000475251 SLC35E1Q96K37 410 aa8.82□□□□□ -1
SKA3-206ENST00000475251 NAA60Q9H7X0 242 aa8.82□□□□□ -1
SKA3-206ENST00000475251 Q9H8V8 135 aa8.82□□□□□ -1
SKA3-206ENST00000475251 CBY3A6NI87 242 aa8.81□□□□□ -1
SKA3-206ENST00000475251 ZNF705GA8MUZ8 300 aaPredicted RBP8.81□□□□□ -1
SKA3-206ENST00000475251 FAM25AB3EWG3 89 aa8.81□□□□□ -1
SKA3-206ENST00000475251 FAM25CB3EWG5 89 aa8.81□□□□□ -1
SKA3-206ENST00000475251 FAM25GB3EWG6 89 aa8.81□□□□□ -1
SKA3-206ENST00000475251 CFDP00746 253 aaPredicted RBP8.81□□□□□ -1
SKA3-206ENST00000475251 SURF2Q15527 256 aaPredicted RBP8.81□□□□□ -1
SKA3-206ENST00000475251 TMEM268Q5VZI3 342 aa8.81□□□□□ -1
SKA3-206ENST00000475251 MZT2AQ6P582 158 aa8.81□□□□□ -1
SKA3-206ENST00000475251 AMTNQ6UX39 209 aa8.81□□□□□ -1
SKA3-206ENST00000475251 SSX7Q7RTT5 188 aa8.81□□□□□ -1
SKA3-206ENST00000475251 SELENOHQ8IZQ5 122 aaKnown RBP8.81□□□□□ -1
SKA3-206ENST00000475251 LGI3Q8N145 548 aa8.81□□□□□ -1
SKA3-206ENST00000475251 LHFPL5Q8TAF8 219 aa8.81□□□□□ -1
SKA3-206ENST00000475251 MTFP1Q9UDX5 166 aa8.81□□□□□ -1
SKA3-206ENST00000475251 APOBP04114 4563 aaKnown RBP8.8□□□□□ -1
SKA3-206ENST00000475251 A0A1W2PPQ1 181 aa8.8□□□□□ -1
SKA3-206ENST00000475251 HPGDSO60760 199 aa8.8□□□□□ -1
SKA3-206ENST00000475251 RAB3DO95716 219 aa8.8□□□□□ -1
SKA3-206ENST00000475251 ZNF182P17025 639 aaPredicted RBP8.8□□□□□ -1
SKA3-206ENST00000475251 ZNF90Q03938 601 aa8.8□□□□□ -1
SKA3-206ENST00000475251 SPINK13Q1W4C9 94 aa8.8□□□□□ -1
SKA3-206ENST00000475251 RNASE12Q5GAN4 147 aaKnown RBP8.8□□□□□ -1
SKA3-206ENST00000475251 TMEM256Q8N2U0 113 aa8.8□□□□□ -1
SKA3-206ENST00000475251 TMEM229BQ8NBD8 167 aa8.8□□□□□ -1
SKA3-206ENST00000475251 DTD1Q8TEA8 209 aa8.8□□□□□ -1
SKA3-206ENST00000475251 RNF141Q8WVD5 230 aa8.8□□□□□ -1
SKA3-206ENST00000475251 IL22RA2Q969J5 263 aa8.8□□□□□ -1
SKA3-206ENST00000475251 YIPF6Q96EC8 236 aa8.8□□□□□ -1
SKA3-206ENST00000475251 Q9H3A6 140 aa8.8□□□□□ -1
SKA3-206ENST00000475251 PTTG2Q9NZH5 202 aa8.8□□□□□ -1
SKA3-206ENST00000475251 SLC45A2Q9UMX9 530 aa8.8□□□□□ -1
SKA3-206ENST00000475251 IGKV1D-37A0A075B6S9 117 aa8.79□□□□□ -1
SKA3-206ENST00000475251 CCR6P51684 374 aa8.79□□□□□ -1
SKA3-206ENST00000475251 CNN1P51911 297 aaKnown RBP8.79□□□□□ -1
SKA3-206ENST00000475251 GAMTQ14353 236 aa8.79□□□□□ -1
SKA3-206ENST00000475251 MEF2DQ14814 521 aa8.79□□□□□ -1
SKA3-206ENST00000475251 GPR107Q5VW38 600 aa8.79□□□□□ -1
SKA3-206ENST00000475251 GGNBP1Q5YKI7 109 aa8.79□□□□□ -1
SKA3-206ENST00000475251 STEAP1BQ6NZ63 245 aa8.79□□□□□ -1
SKA3-206ENST00000475251 OR11H7Q8NGC8 314 aa8.79□□□□□ -1
SKA3-206ENST00000475251 OR4D10Q8NGI6 311 aa8.79□□□□□ -1
SKA3-206ENST00000475251 OR4D5Q8NGN0 318 aa8.79□□□□□ -1
SKA3-206ENST00000475251 OR1B1Q8NGR6 318 aa8.79□□□□□ -1
SKA3-206ENST00000475251 OR52I2Q8NH67 350 aa8.79□□□□□ -1
SKA3-206ENST00000475251 AP3S1Q92572 193 aa8.79□□□□□ -1
SKA3-206ENST00000475251 C16orf74Q96GX8 76 aa8.79□□□□□ -1
SKA3-206ENST00000475251 C20orf173Q96LM9 149 aa8.79□□□□□ -1
SKA3-206ENST00000475251 GPR82Q96P67 336 aa8.79□□□□□ -1
SKA3-206ENST00000475251 TRGV9Q99603 122 aa8.79□□□□□ -1
SKA3-206ENST00000475251 HSPB7Q9UBY9 170 aa8.79□□□□□ -1
SKA3-206ENST00000475251 TMEM56-RWDD3S4R434 201 aa8.79□□□□□ -1
SKA3-206ENST00000475251 CRYM-AS1A6NIL9 109 aa8.78□□□□□ -1
SKA3-206ENST00000475251 M0R2Z0 102 aa8.78□□□□□ -1
SKA3-206ENST00000475251 CRXO43186 299 aaPredicted RBP8.78□□□□□ -1
SKA3-206ENST00000475251 ADAP1O75689 374 aa8.78□□□□□ -1
SKA3-206ENST00000475251 TAS2R60P59551 318 aa8.78□□□□□ -1
SKA3-206ENST00000475251 SSBP1Q04837 148 aaKnown RBP8.78□□□□□ -1
SKA3-206ENST00000475251 OR10J6PQ8NGY7 276 aa8.78□□□□□ -1
SKA3-206ENST00000475251 ZNF503Q96F45 646 aa8.78□□□□□ -1
SKA3-206ENST00000475251 LINC01587Q99440 93 aa8.78□□□□□ -1
SKA3-206ENST00000475251 RTBDNQ9BSG5 229 aaPredicted RBP8.78□□□□□ -1
SKA3-206ENST00000475251 UPK3BQ9BT76 320 aa8.78□□□□□ -1
SKA3-206ENST00000475251 RSG1Q9BU20 258 aa8.78□□□□□ -1
SKA3-206ENST00000475251 SLC25A22Q9H936 323 aa8.78□□□□□ -1
SKA3-206ENST00000475251 KCNIP3Q9Y2W7 256 aa8.78□□□□□ -1
SKA3-206ENST00000475251 TIMM8BQ9Y5J9 83 aaPredicted RBP8.78□□□□□ -1
SKA3-206ENST00000475251 HERC1Q15751 4861 aa8.78□□□□□ -1
SKA3-206ENST00000475251 PIGBOS1A0A0B4J2F0 54 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 PLAC8L1A1L4L8 177 aa8.77□□□□□ -1.01
SKA3-206ENST00000475251 DISC1C4P0D8 188 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms