RNA–Protein interactions for RNA: ENST00000474911.5

RTN1-205, Transcript of reticulon 1, humanhuman

TSL 2

Gene RTN1, Length 1,412 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-205ENST00000474911 OR5G3P0C626 314 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 ZNF726P1Q15940 193 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 C10orf113Q5VZT2 155 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 OR1B1Q8NGR6 318 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 MBD3L1Q8WWY6 194 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 RNF125Q96EQ8 232 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 MRPL32Q9BYC8 188 aaKnown RBP10.35□□□□□ -0.75
RTN1-205ENST00000474911 DOK5Q9P104 306 aa10.35□□□□□ -0.75
RTN1-205ENST00000474911 TRAV1-1A0A0B4J248 108 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 ANKRD34BA5PLL1 514 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 MAP1LC3B2A6NCE7 125 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 PPP5D1E7EU14 171 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 HBE1P02100 147 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 IL4P05112 153 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 LGALS1P09382 135 aaKnown RBP10.34□□□□□ -0.75
RTN1-205ENST00000474911 ORM2P19652 201 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 FAM78BQ5VT40 261 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 S100A7AQ86SG5 101 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 LYPD6BQ8NI32 183 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 SFT2D1Q8WV19 159 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 TMEM37Q8WXS4 190 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 RAB24Q969Q5 203 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 PBDC1Q9BVG4 233 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 MAP1LC3BQ9GZQ8 125 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 HRH4Q9H3N8 390 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 PEF1Q9UBV8 284 aaKnown RBP10.34□□□□□ -0.75
RTN1-205ENST00000474911 FUT9Q9Y231 359 aa10.34□□□□□ -0.75
RTN1-205ENST00000474911 PUS1Q9Y606 427 aaKnown RBP eCLIP10.34□□□□□ -0.75
RTN1-205ENST00000474911 TRBV12-3P01733 135 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 NDUFA5Q16718 116 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 SAMD5Q5TGI4 173 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 LCN15Q6UWW0 184 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 PATE2Q6UY27 113 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 SSX7Q7RTT5 188 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 SEPSECSQ9HD40 501 aaKnown RBP10.33□□□□□ -0.76
RTN1-205ENST00000474911 PFDN2Q9UHV9 154 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 HIGD1AQ9Y241 93 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 A0A1W2PRX2 142 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 LINC00862A6NCI5 91 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 BMPR1BO00238 502 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 GGCTO75223 188 aaKnown RBP10.33□□□□□ -0.76
RTN1-205ENST00000474911 S100A7P31151 101 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 CDX1P47902 265 aaPredicted RBP10.33□□□□□ -0.76
RTN1-205ENST00000474911 TAS2R45P59539 299 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 WFDC9Q8NEX5 89 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 OR5B12Q96R08 314 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 MED9Q9NWA0 146 aa10.33□□□□□ -0.76
RTN1-205ENST00000474911 TECRQ9NZ01 308 aaKnown RBP10.33□□□□□ -0.76
RTN1-205ENST00000474911 MRPL27Q9P0M9 148 aaKnown RBP10.33□□□□□ -0.76
RTN1-205ENST00000474911 NOTCH3Q9UM47 2321 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 IGHV3-35A0A0C4DH35 117 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 NUDT19A8MXV4 375 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 NDUFA4O00483 81 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 STAG3L2P0CL84 134 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 STAG3L3P0CL85 134 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 USF2Q15853 346 aaPredicted RBP10.32□□□□□ -0.76
RTN1-205ENST00000474911 KHDC3LQ587J8 217 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 KHDC1LQ5JSQ8 128 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 KPRPQ5T749 579 aaPredicted RBP10.32□□□□□ -0.76
RTN1-205ENST00000474911 SPATA31B1PQ5VZV4 182 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 TOMM20LQ6UXN7 152 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 IL34Q6ZMJ4 242 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 MIR17HGQ75NE6 70 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 LINC00305Q7Z4B0 112 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 C4orf3Q8WVX3 66 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 ZNF414Q96IQ9 312 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 UHRF2Q96PU4 802 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 ZFAND3Q9H8U3 227 aa10.32□□□□□ -0.76
RTN1-205ENST00000474911 A0A1B0GV50 99 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 G3V4G9 280 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 I3L521 148 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 HMGB3O15347 200 aaKnown RBP10.31□□□□□ -0.76
RTN1-205ENST00000474911 C8orf88P0DMB2 117 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 FGF8P55075 233 aaPredicted RBP10.31□□□□□ -0.76
RTN1-205ENST00000474911 BEAN1Q3B7T3 259 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 C1QL4Q86Z23 238 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 SLC25A39Q9BZJ4 359 aaPredicted RBP10.31□□□□□ -0.76
RTN1-205ENST00000474911 RABAC1Q9UI14 185 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 RNF24Q9Y225 148 aa10.31□□□□□ -0.76
RTN1-205ENST00000474911 H3BRN7 92 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 EIF3GO75821 320 aaKnown RBP eCLIP10.3□□□□□ -0.76
RTN1-205ENST00000474911 CXorf1O96002 111 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 PF4P02776 101 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 HSPB1P04792 205 aaKnown RBP10.3□□□□□ -0.76
RTN1-205ENST00000474911 ARL14EPLP0DKL9 152 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 PQLC2Q6ZP29 291 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 COMMD7Q86VX2 200 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 MARC2Q969Z3 335 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 SHANK2-AS3Q9BTD1 123 aa10.3□□□□□ -0.76
RTN1-205ENST00000474911 CD33P20138 364 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 RPEL1Q2QD12 228 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 FAM106AQ4KMX7 169 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 MORN5Q5VZ52 161 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 GPHB5Q86YW7 130 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 KLHL30-AS1Q8NEE0 82 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 STXBP6Q8NFX7 210 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 TMEM190Q8WZ59 177 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 METTL26Q96S19 204 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 SLC25A2Q9BXI2 301 aa10.29□□□□□ -0.76
RTN1-205ENST00000474911 IGHV4OR15-8A0A075B7B6 117 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms