RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 DFFBO76075 338 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PET100P0DJ07 73 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 NPPCP23582 126 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PLP1P60201 277 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 HBG1P69891 147 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 HBG2P69892 147 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PRR20EP86478 221 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PRR20CP86479 221 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PRR20DP86480 221 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PRR20BP86481 221 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 PRR20AP86496 221 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 OPCMLQ14982 345 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 ATP6V1FQ16864 119 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 GCSAMLQ5JQS6 135 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 MORN5Q5VZ52 161 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 MIC13Q5XKP0 118 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 TEPPQ6URK8 271 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 ZNF546Q86UE3 836 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 BPIFCQ8NFQ6 507 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 GLMPQ8WWB7 406 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 TMEM37Q8WXS4 190 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 C19orf73Q9NVV2 129 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 TECRQ9NZ01 308 aaKnown RBP5.23□□□□□ -1.57
LIMD1-204ENST00000474665 FBXL17Q9UF56 701 aa5.23□□□□□ -1.57
LIMD1-204ENST00000474665 ZNF256Q9Y2P7 627 aaPredicted RBP5.23□□□□□ -1.57
LIMD1-204ENST00000474665 CSMD3Q7Z407 3707 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 HNRNPCP07910 306 aaKnown RBP eCLIP5.22□□□□□ -1.57
LIMD1-204ENST00000474665 CXCL2P19875 107 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 FGF7P21781 194 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 CAMLGP49069 296 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 LYZP61626 148 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 FGL1Q08830 312 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 C16orf54Q6UWD8 224 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 TCTE3Q8IZS6 198 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 UHRF2Q96PU4 802 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 METTL26Q96S19 204 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 ATP5SQ99766 215 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 NEURL2Q9BR09 285 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 GINS3Q9BRX5 216 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 PBDC1Q9BVG4 233 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 NPCDR1Q9BY65 106 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 GPR61Q9BZJ8 451 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 WDR61Q9GZS3 305 aaKnown RBP5.22□□□□□ -1.57
LIMD1-204ENST00000474665 CYTL1Q9NRR1 136 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 DOK5Q9P104 306 aa5.22□□□□□ -1.57
LIMD1-204ENST00000474665 LYSTQ99698 3801 aa5.21□□□□□ -1.57
LIMD1-204ENST00000474665 TRAV25A0A0B4J276 109 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 ZNF98A6NK75 572 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 H3BRN7 92 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 TSPAN4O14817 238 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 MRPS12O15235 138 aaKnown RBP5.21□□□□□ -1.58
LIMD1-204ENST00000474665 ARPC5O15511 151 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SCGB2A1O75556 95 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 FABP1P07148 127 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 CD7P09564 240 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 GP9P14770 177 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 ORM2P19652 201 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 RPL29P47914 159 aaKnown RBP5.21□□□□□ -1.58
LIMD1-204ENST00000474665 EIF2B2P49770 351 aaKnown RBP5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SELENOTP62341 195 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 LEMD1Q68G75 181 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 TCF24Q7RTU0 167 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 FAM24BQ8N5W8 94 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 OR1B1Q8NGR6 318 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 OR2K2Q8NGT1 345 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 DYNLRB2Q8TF09 96 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 DCANP1Q8TF63 244 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SHANK2-AS3Q9BTD1 123 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 RSG1Q9BU20 258 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SCRT1Q9BWW7 348 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SLC25A39Q9BZJ4 359 aaPredicted RBP5.21□□□□□ -1.58
LIMD1-204ENST00000474665 WFDC10AQ9H1F0 79 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SLC39A9Q9NUM3 307 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 RABAC1Q9UI14 185 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 PXMP4Q9Y6I8 212 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 SMAD5-AS1Q9Y6J3 95 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 ABCA13Q86UQ4 5058 aa5.21□□□□□ -1.58
LIMD1-204ENST00000474665 IGKV3-7A0A075B6H7 116 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 HMSDA8MTL9 139 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 MPDU1O75352 247 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 HYPMO75409 117 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 CFDP00746 253 aaPredicted RBP5.2□□□□□ -1.58
LIMD1-204ENST00000474665 AP2S1P53680 142 aaPredicted RBP5.2□□□□□ -1.58
LIMD1-204ENST00000474665 B2MP61769 119 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 GUCA2BQ16661 112 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 ODF3L2Q3SX64 289 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 SPATA31B1PQ5VZV4 182 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 RPL7L1Q6DKI1 246 aaKnown RBP5.2□□□□□ -1.58
LIMD1-204ENST00000474665 ZFAND6Q6FIF0 208 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 LCN12Q6JVE5 192 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 GBGT1Q8N5D6 347 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 KCNRGQ8N5I3 272 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 INO80EQ8NBZ0 244 aaPredicted RBP5.2□□□□□ -1.58
LIMD1-204ENST00000474665 CITED4Q96RK1 184 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 PARD6GQ9BYG4 376 aaPredicted RBP5.2□□□□□ -1.58
LIMD1-204ENST00000474665 MFFQ9GZY8 342 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 ARL6Q9H0F7 186 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 SLC25A32Q9H2D1 315 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 MS4A6AQ9H2W1 248 aa5.2□□□□□ -1.58
LIMD1-204ENST00000474665 PLA2G2EQ9NZK7 142 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms