RNA–Protein interactions for RNA: ENST00000474648.5

COL8A1-206, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 5

Gene COL8A1, Length 841 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-206ENST00000474648 RNF125Q96EQ8 232 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 PSMG3Q9BT73 122 aaPredicted RBP7.62□□□□□ -1.19
COL8A1-206ENST00000474648 C20orf24Q9BUV8 137 aa7.62□□□□□ -1.19
COL8A1-206ENST00000474648 TMEM213A2RRL7 107 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 A8MWP6 167 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 OVOL1O14753 267 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 ZNF207O43670 478 aaKnown RBP7.61□□□□□ -1.19
COL8A1-206ENST00000474648 HYPMO75409 117 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 CSN3P07498 182 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 C8orf88P0DMB2 117 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 SPP1P10451 314 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 TPT1P13693 172 aaKnown RBP7.61□□□□□ -1.19
COL8A1-206ENST00000474648 ORM2P19652 201 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 CRYBB3P26998 211 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 ELLP55199 621 aaPredicted RBP7.61□□□□□ -1.19
COL8A1-206ENST00000474648 LYZP61626 148 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 WFDC9Q8NEX5 89 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 OR2G3Q8NGZ4 309 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 ST8SIA2Q92186 375 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 SLC25A32Q9H2D1 315 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 VSIRQ9H7M9 311 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 DNAJC4Q9NNZ3 241 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 UFC1Q9Y3C8 167 aa7.61□□□□□ -1.19
COL8A1-206ENST00000474648 C2orf70A6NJV1 201 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 M0QZ24 198 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 PF4P02776 101 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 SEC11BP0C7V7 166 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 C4BPBP20851 252 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 EIF5AP63241 154 aaKnown RBP7.6□□□□□ -1.19
COL8A1-206ENST00000474648 SERF2P84101 59 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 FFAR4Q5NUL3 377 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 PXDC1Q5TGL8 231 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 Q6ZRG5 221 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 OR9G4Q8NGQ1 327 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 OR1B1Q8NGR6 318 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 PBDC1Q9BVG4 233 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 DOK5Q9P104 306 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 SMPXQ9UHP9 88 aa7.6□□□□□ -1.19
COL8A1-206ENST00000474648 IGHV3-49A0A0A0MS15 119 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 IGHV7-4-1A0A0J9YVY3 117 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 OR5G3P0C626 314 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 FOLR2P14207 255 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 CBLN1P23435 193 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 NPPCP23582 126 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 MORN5Q5VZ52 161 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 SPATA31B1PQ5VZV4 182 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 GATAD1Q8WUU5 269 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 METTL26Q96S19 204 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 SHANK2-AS3Q9BTD1 123 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 DAZ1Q9NQZ3 744 aaKnown RBP7.59□□□□□ -1.19
COL8A1-206ENST00000474648 KCNIP2Q9NS61 270 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 RPRMQ9NS64 109 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 RABAC1Q9UI14 185 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 HIGD1AQ9Y241 93 aa7.59□□□□□ -1.19
COL8A1-206ENST00000474648 IGHV3OR16-13A0A075B7E8 117 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 IGHV3-74A0A0B4J1X5 117 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 TRAV5A0A0B4J249 113 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 IGHV3-66A0A0C4DH42 116 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 H3BRN7 92 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 CHEK1O14757 476 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 BUB3O43684 328 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 COX7A2P2O60397 106 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 M6PRP20645 277 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 RAB2AP61019 212 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 ACOT6Q3I5F7 207 aaPredicted RBP7.58□□□□□ -1.2
COL8A1-206ENST00000474648 C10orf113Q5VZT2 155 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 RPP25LQ8N5L8 163 aaKnown RBP7.58□□□□□ -1.2
COL8A1-206ENST00000474648 OR1L4Q8NGR5 311 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 TMED6Q8WW62 240 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 UHRF2Q96PU4 802 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 RHPN1-AS1Q9BWJ2 59 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 SLC25A39Q9BZJ4 359 aaPredicted RBP7.58□□□□□ -1.2
COL8A1-206ENST00000474648 SEPSECSQ9HD40 501 aaKnown RBP7.58□□□□□ -1.2
COL8A1-206ENST00000474648 SIGLEC8Q9NYZ4 499 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 PEMTQ9UBM1 199 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 PKD1L1Q8TDX9 2849 aa7.58□□□□□ -1.2
COL8A1-206ENST00000474648 ZNF98A6NK75 572 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 SEC14L6B5MCN3 397 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 EIF3GO75821 320 aaKnown RBP eCLIP7.57□□□□□ -1.2
COL8A1-206ENST00000474648 MBP02144 154 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 LEMD1Q68G75 181 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 C16orf54Q6UWD8 224 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 MIR17HGQ75NE6 70 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 LINC00305Q7Z4B0 112 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 OR10G4Q8NGN3 311 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 OR10G9Q8NGN4 311 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 OR10G7Q8NGN6 311 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 MARC2Q969Z3 335 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 FAM167A-AS1Q96KT0 104 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 C17orf77Q96MU5 243 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 PFDN5Q99471 154 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 ELOVL1Q9BW60 279 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 SCRT1Q9BWW7 348 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 TECRQ9NZ01 308 aaKnown RBP7.57□□□□□ -1.2
COL8A1-206ENST00000474648 MLXQ9UH92 298 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 SELENOKQ9Y6D0 94 aa7.57□□□□□ -1.2
COL8A1-206ENST00000474648 MRPS12O15235 138 aaKnown RBP7.56□□□□□ -1.2
COL8A1-206ENST00000474648 FHITP49789 147 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 ZNF726P1Q15940 193 aa7.56□□□□□ -1.2
COL8A1-206ENST00000474648 DEFB114Q30KQ6 69 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms