RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 VWC2Q2TAL6 325 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 RPL7L1Q6DKI1 246 aaKnown RBP8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF767PQ75MW2 155 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 BAP18Q8IXM2 172 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 KIR2DL5AQ8N109 375 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF114Q8NC26 417 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 SLC24A4Q8NFF2 622 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 OR10P1Q8NGE3 313 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 OR5C1Q8NGR4 320 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 KIR2DL5BQ8NHK3 375 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 PINX1Q96BK5 328 aaKnown RBP8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 PHYHIPLQ96FC7 376 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 MISP3Q96FF7 219 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 TXN2Q99757 166 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF471Q9BX82 626 aaPredicted RBP8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 PARD6GQ9BYG4 376 aaPredicted RBP8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 SMIM3Q9BZL3 60 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 SMPXQ9UHP9 88 aa8.21□□□□□ -1.1
SEMA4D-216ENST00000474258 A0A0J9YWU9 116 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 IFNA7P01567 189 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 TPT1P13693 172 aaKnown RBP8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 NPY1RP25929 384 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 SNCAP37840 140 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 SUB1P53999 127 aaKnown RBP eCLIP8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 CMC4P56277 68 aaPredicted RBP8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF266Q14584 549 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 DEFB135Q30KP9 77 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 ODF3L2Q3SX64 289 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 TMEM217Q8N7C4 229 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 STPG3Q8N7X2 389 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 TMEM116Q8NCL8 245 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 ATP5SQ99766 215 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 GINS3Q9BRX5 216 aa8.2□□□□□ -1.1
SEMA4D-216ENST00000474258 IGHV7-4-1A0A0J9YVY3 117 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 CXorf65A6NEN9 183 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 FNDC10F2Z333 226 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 I3L2K1 104 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 CHEK1O14757 476 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 YIF1AO95070 293 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 RPL35AP18077 110 aaKnown RBP8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 FCGR2BP31994 310 aaPredicted RBP8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 GPX4P36969 197 aaPredicted RBP8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 DLK1P80370 383 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 SLC38A11Q08AI6 406 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 RNF183Q96D59 192 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 RNF2Q99496 336 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 RHPN1-AS1Q9BWJ2 59 aa8.19□□□□□ -1.1
SEMA4D-216ENST00000474258 NUPR2A6NF83 97 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 GNG7O60262 68 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 MT-CO2P00403 227 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 IFNA4P05014 189 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 ATF4P18848 351 aaPredicted RBP8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 PMS2P11Q13670 270 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 CLINT1Q14677 625 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 OR8G2PQ6IF36 304 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 EIF5AL1Q6IS14 154 aaKnown RBP8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 RNASEH2CQ8TDP1 164 aaKnown RBP8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF414Q96IQ9 312 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 TMEM147Q9BVK8 224 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 MAP6D1Q9H9H5 199 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 AGRNO00468 2067 aa8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 EPPK1P58107 5090 aaKnown RBP8.18□□□□□ -1.1
SEMA4D-216ENST00000474258 IGHV3-49A0A0A0MS15 119 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 IFNA5P01569 189 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 CD5P06127 495 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 SEC11BP0C7V7 166 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 SPP1P10451 314 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 PAFAH1B2P68402 229 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 CEMP1Q6PRD7 247 aaPredicted RBP8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 APRG1Q8IVJ8 170 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 LINC00476Q8WZB0 136 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 GNPNAT1Q96EK6 184 aaPredicted RBP8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 WDR61Q9GZS3 305 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 UQCC1Q9NVA1 299 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 PAIP2BQ9ULR5 123 aaKnown RBP8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 WDR83OSQ9Y284 106 aa8.17□□□□□ -1.1
SEMA4D-216ENST00000474258 CORTO00230 105 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 LY6G6CO95867 125 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 IGHV3-48P01763 117 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 NPBWR1P48145 328 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 TFPI2P48307 235 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 FAM90A2PQ658T7 463 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 ALKAL2Q6UX46 152 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 LILRB2Q8N423 598 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 SCGB1C1Q8TD33 95 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 CSTL1Q9H114 145 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 NPVFQ9HCQ7 196 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 PLA2G2EQ9NZK7 142 aa8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 KLK5Q9Y337 293 aaPredicted RBP8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 PLECQ15149 4684 aaKnown RBP8.16□□□□□ -1.1
SEMA4D-216ENST00000474258 IGKV3-7A0A075B6H7 116 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 IGHV3OR16-13A0A075B7E8 117 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 IGHV3-74A0A0B4J1X5 117 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 MPDU1O75352 247 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 ATP6V0CP27449 155 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 ZNF124Q15973 351 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 MLANAQ16655 118 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 TOMM20LQ6UXN7 152 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 TCF24Q7RTU0 167 aa8.15□□□□□ -1.1
SEMA4D-216ENST00000474258 TMEM144Q7Z5S9 345 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms