RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 RNF212Q495C1 297 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 VPS13DQ5THJ4 4388 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 ZNF709Q8N972 641 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 OR1S1Q8NH92 325 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 GPR82Q96P67 336 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 SLC25A21Q9BQT8 299 aaPredicted RBP9.69□□□□□ -0.86
CHD3-209ENST00000473376 KRTAP17-1Q9BYP8 105 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 SLIRPQ9GZT3 109 aaKnown RBP9.69□□□□□ -0.86
CHD3-209ENST00000473376 TMED3Q9Y3Q3 217 aa9.69□□□□□ -0.86
CHD3-209ENST00000473376 FABP12A6NFH5 140 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 PSG9Q00887 426 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 ZNF90Q03938 601 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 EBLN2Q6P2I7 272 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 OR8I2Q8N0Y5 310 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 COQ8AQ8NI60 647 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 PBDC1Q9BVG4 233 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 WDR12Q9GZL7 423 aaKnown RBP9.68□□□□□ -0.86
CHD3-209ENST00000473376 RPRMQ9NS64 109 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 MCUBQ9NWR8 336 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 DKK2Q9UBU2 259 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 GOLT1BQ9Y3E0 138 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 DNAH10Q8IVF4 4471 aa9.68□□□□□ -0.86
CHD3-209ENST00000473376 A0A0J9YX75 114 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 A0A1B0GVY2 172 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 TNFSF8P32971 234 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 GALR1P47211 349 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 FAM3BP58499 235 aaPredicted RBP9.67□□□□□ -0.86
CHD3-209ENST00000473376 B2MP61769 119 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 LINC00052Q96N35 136 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 NIPSNAP3BQ9BS92 247 aa9.67□□□□□ -0.86
CHD3-209ENST00000473376 IFNA21P01568 189 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 HBE1P02100 147 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 MED14OSP0DP75 135 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 UBE2MP61081 183 aaKnown RBP9.66□□□□□ -0.86
CHD3-209ENST00000473376 LYZP61626 148 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 GDF5OSQ5U4N7 250 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 OR1B1Q8NGR6 318 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 DNAH6Q9C0G6 4158 aa9.66□□□□□ -0.86
CHD3-209ENST00000473376 HERC2O95714 4834 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 IGKV1OR2-108A0A075B7D4 117 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 PRSS46E5RG02 174 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 PPP1R14BQ96C90 147 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 PRR13Q9NZ81 148 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 DOK5Q9P104 306 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 RNF24Q9Y225 148 aa9.65□□□□□ -0.86
CHD3-209ENST00000473376 ZNF98A6NK75 572 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 SYNGR2O43760 224 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 NOL3O60936 208 aaKnown RBP9.64□□□□□ -0.87
CHD3-209ENST00000473376 DUSP14O95147 198 aaKnown RBP9.64□□□□□ -0.87
CHD3-209ENST00000473376 TSPOP30536 169 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 RRN3P1Q2M238 152 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 FAM222AQ5U5X8 452 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 FAM78BQ5VT40 261 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 S100A7AQ86SG5 101 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 TOMM5Q8N4H5 51 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 BPIFCQ8NFQ6 507 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 OR4B1Q8NGF8 309 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 TRIM63Q969Q1 353 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 IGF2BP2-AS1Q96M15 143 aa9.64□□□□□ -0.87
CHD3-209ENST00000473376 C4orf46Q504U0 113 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 SOHLH1Q5JUK2 328 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 AMTNQ6UX39 209 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 Q6ZR54 194 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 ZNF767PQ75MW2 155 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 TMEM144Q7Z5S9 345 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 C15orf53Q8NAA6 179 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 MCFD2Q8NI22 146 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 C16orf92Q96LL3 132 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 SLC35B3Q9H1N7 401 aa9.63□□□□□ -0.87
CHD3-209ENST00000473376 LOC102723971A0A1B0GUV8 181 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 PRSS29PA6NIE9 313 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 LYRM9A8MSI8 78 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 FNDC10F2Z333 226 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 H3BMQ9 156 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 RTL8CO15255 209 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 SFT2D2O95562 160 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 IGKV3-20P01619 116 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 PLP1P60201 277 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 SELENOTP62341 195 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 ID3Q02535 119 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 TMED4Q7Z7H5 227 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 C7orf50Q9BRJ6 194 aaKnown RBP9.62□□□□□ -0.87
CHD3-209ENST00000473376 TMEM147Q9BVK8 224 aa9.62□□□□□ -0.87
CHD3-209ENST00000473376 YTHDF2Q9Y5A9 579 aaKnown RBP9.62□□□□□ -0.87
CHD3-209ENST00000473376 IGHV3OR16-12A0A075B7B8 117 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 VAMP1P23763 118 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 EMP1P54849 157 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 OR2F1Q13607 317 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 C17orf77Q96MU5 243 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 RSG1Q9BU20 258 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 MAGT1Q9H0U3 335 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 SLC25A32Q9H2D1 315 aa9.61□□□□□ -0.87
CHD3-209ENST00000473376 STRAPQ9Y3F4 350 aaKnown RBP9.61□□□□□ -0.87
CHD3-209ENST00000473376 K7EPK0 472 aa9.6□□□□□ -0.87
CHD3-209ENST00000473376 IAPPP10997 89 aa9.6□□□□□ -0.87
CHD3-209ENST00000473376 RPL7P18124 248 aaKnown RBP9.6□□□□□ -0.87
CHD3-209ENST00000473376 PYDC2Q56P42 97 aa9.6□□□□□ -0.87
CHD3-209ENST00000473376 PXDC1Q5TGL8 231 aa9.6□□□□□ -0.87
CHD3-209ENST00000473376 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms