RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 SCGB2B2Q4G0G5 96 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 HAGHLQ6PII5 290 aaPredicted RBP0.62□□□□□ -2.31
CLCC1-208ENST00000473062 SPATA8Q6RVD6 105 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 LINC00575Q6W349 94 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 OR5D14Q8NGL3 314 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 OR10AC1Q8NH08 325 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 LYSMD1Q96S90 227 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 TMEM126AQ9H061 195 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 UBAP1Q9NZ09 502 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 FAM32AQ9Y421 112 aaKnown RBP0.62□□□□□ -2.31
CLCC1-208ENST00000473062 CHCHD2Q9Y6H1 151 aaPredicted RBP0.62□□□□□ -2.31
CLCC1-208ENST00000473062 SBF1O95248 1867 aa0.62□□□□□ -2.31
CLCC1-208ENST00000473062 CCDC88AQ3V6T2 1871 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 TRAV4A0A0B4J268 109 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 F8W1H4 67 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 ERC2-IT1O76042 136 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 IGLV3-1P01715 115 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 RNASE4P34096 147 aaKnown RBP0.61□□□□□ -2.31
CLCC1-208ENST00000473062 UBE2BP63146 152 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 TMED2Q15363 201 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 PDZD9Q8IXQ8 264 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 OR10K1Q8NGX5 313 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 OR10X1Q8NGY0 326 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 LINC00052Q96N35 136 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 PRAP1Q96NZ9 151 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 MED29Q9NX70 200 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 HSPB8Q9UJY1 196 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 DENND4CQ5VZ89 1909 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 TAF1LQ8IZX4 1826 aa0.61□□□□□ -2.31
CLCC1-208ENST00000473062 TNRC6AQ8NDV7 1962 aaKnown RBP0.6□□□□□ -2.31
CLCC1-208ENST00000473062 TRAV10A0A0B4J240 114 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 NDUFC2O95298 119 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 SERPINA1P01009 418 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 COX7CP15954 63 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 FADDQ13158 208 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 GOLT1AQ6ZVE7 132 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 IFT20Q8IY31 132 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 OR10AG1Q8NH19 301 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 PBOV1Q9GZY1 135 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 TMEM138Q9NPI0 162 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 OPTCQ9UBM4 332 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 OR52A1Q9UKL2 312 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 PCTPQ9UKL6 214 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 CNTRLQ7Z7A1 2325 aa0.6□□□□□ -2.31
CLCC1-208ENST00000473062 ASCC3Q8N3C0 2202 aaKnown RBP0.6□□□□□ -2.31
CLCC1-208ENST00000473062 SCN3AQ9NY46 2000 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 TAX1BP3O14907 124 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 E2F6O75461 281 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 S100A6P06703 90 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 HLA-EP13747 358 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 EFNA4P52798 201 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 HSPE1P61604 102 aaKnown RBP0.59□□□□□ -2.31
CLCC1-208ENST00000473062 CDK6Q00534 326 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 PSMF1Q92530 271 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 MUCL1Q96DR8 90 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 PHB2Q99623 299 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 TCEAL2Q9H3H9 227 aaPredicted RBP0.59□□□□□ -2.31
CLCC1-208ENST00000473062 ENY2Q9NPA8 101 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 TAS2R7Q9NYW3 318 aa0.59□□□□□ -2.31
CLCC1-208ENST00000473062 RIMBP3CA6NJZ7 1639 aa0.59□□□□□ -2.32
CLCC1-208ENST00000473062 RIMBP3BA6NNM3 1639 aa0.59□□□□□ -2.32
CLCC1-208ENST00000473062 RIMBP3Q9UFD9 1639 aa0.59□□□□□ -2.32
CLCC1-208ENST00000473062 ECM29Q5VYK3 1845 aa0.59□□□□□ -2.32
CLCC1-208ENST00000473062 HMGB3O15347 200 aaKnown RBP0.58□□□□□ -2.32
CLCC1-208ENST00000473062 CST8O60676 142 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 CXCL8P10145 99 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 SRIP30626 198 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 RAB5CP51148 216 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 ZNF833PQ6ZTB9 187 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 Q8IYB0 196 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 PRRT1Q99946 306 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 NPCDR1Q9BY65 106 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 RNF11Q9Y3C5 154 aa0.58□□□□□ -2.32
CLCC1-208ENST00000473062 HECW2Q9P2P5 1572 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 CCDC144AA2RUR9 1427 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 A0A087WSZ3 146 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 TRAV27A0A087WT01 109 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 TMEM210A6NLX4 147 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 IFNA4P05014 189 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 CST2P09228 141 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 CTXN2P0C2S0 81 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 HOXA6P31267 233 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 ATP5G3P48201 142 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 FXYD6P3P58550 94 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 ROMO1P60602 79 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 VBP1P61758 197 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 GRINAQ7Z429 371 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 STAG3L4Q8TBR4 150 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 NIT2Q9NQR4 276 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 PYCARDQ9ULZ3 195 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 ARL5AQ9Y689 179 aa0.57□□□□□ -2.32
CLCC1-208ENST00000473062 MUC5BQ9HC84 5762 aaPredicted RBP0.57□□□□□ -2.32
CLCC1-208ENST00000473062 PEAK1Q9H792 1746 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 DUXBA0A1W2PPF3 345 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 M0R233 179 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 IFNA14P01570 189 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 APOA2P02652 100 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 DEFA3P59666 94 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 ERVS71-1P61550 626 aa0.56□□□□□ -2.32
CLCC1-208ENST00000473062 SPINK9Q5DT21 86 aa0.56□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms