RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 Q6ZTC4 211 aa11.02□□□□□ -0.65
VTI1A-203ENST00000472892 CIB3Q96Q77 187 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-203ENST00000472892 DNAH10Q8IVF4 4471 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 SYNGR2O43760 224 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 CFDP00746 253 aaPredicted RBP11.01□□□□□ -0.65
VTI1A-203ENST00000472892 PSMB3P49720 205 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 LYZP61626 148 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 GDF5OSQ5U4N7 250 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF705AQ6ZN79 300 aaPredicted RBP11.01□□□□□ -0.65
VTI1A-203ENST00000472892 CENPSQ8N2Z9 138 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 LINC00052Q96N35 136 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 CLUHP3Q96NS8 147 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 MAGT1Q9H0U3 335 aa11.01□□□□□ -0.65
VTI1A-203ENST00000472892 SAV1Q9H4B6 383 aaPredicted RBP11.01□□□□□ -0.65
VTI1A-203ENST00000472892 CCDC160A6NGH7 325 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 HOXB5P09067 269 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 DEFB1P60022 68 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 C12orf74Q32Q52 190 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 GGNBP1Q5YKI7 109 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 FOXI2Q6ZQN5 318 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 OR8I2Q8N0Y5 310 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 NEU1Q99519 415 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 RBM38Q9H0Z9 239 aaKnown RBP11□□□□□ -0.65
VTI1A-203ENST00000472892 PAIP2BQ9ULR5 123 aaKnown RBP11□□□□□ -0.65
VTI1A-203ENST00000472892 CELA1Q9UNI1 258 aa11□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF705FA8MVS1 300 aaPredicted RBP10.99□□□□□ -0.65
VTI1A-203ENST00000472892 WRBO00258 174 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF705DP0CH99 300 aaPredicted RBP10.99□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF705BP0CI00 300 aaPredicted RBP10.99□□□□□ -0.65
VTI1A-203ENST00000472892 UBE2MP61081 183 aaKnown RBP10.99□□□□□ -0.65
VTI1A-203ENST00000472892 ID3Q02535 119 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 SPATA31B1PQ5VZV4 182 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 PPP1R14BQ96C90 147 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 SRRQ9GZT4 340 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 SLC45A2Q9UMX9 530 aa10.99□□□□□ -0.65
VTI1A-203ENST00000472892 IGHV4-4A0A075B6R2 117 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 SMIM9A6NGZ8 99 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF701M0R085 212 aaPredicted RBP10.98□□□□□ -0.65
VTI1A-203ENST00000472892 ISLRO14498 428 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 IGKV3-20P01619 116 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 SPANXN5Q5MJ07 72 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 SPANXN2Q5MJ10 180 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 SAMD13Q5VXD3 122 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF709Q8N972 641 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 COQ8AQ8NI60 647 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 C17orf77Q96MU5 243 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 RNF126Q9BV68 326 aa10.98□□□□□ -0.65
VTI1A-203ENST00000472892 DEFB131BA0A096LNP1 70 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 C9orf170A2RU37 121 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF98A6NK75 572 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 NDUFB6O95139 128 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 PAX9P55771 341 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 FXYD7P58549 80 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 BAK1Q16611 211 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 GSG1LQ6UXU4 331 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 TMEM182Q6ZP80 229 aaPredicted RBP10.97□□□□□ -0.65
VTI1A-203ENST00000472892 ZNF767PQ75MW2 155 aa10.97□□□□□ -0.65
VTI1A-203ENST00000472892 STRAPQ9Y3F4 350 aaKnown RBP10.97□□□□□ -0.65
VTI1A-203ENST00000472892 TMEM189A5PLL7 270 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 NAP1L6A6NFF2 107 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 ADAP1O75689 374 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 GATA2P23769 480 aaPredicted RBP10.96□□□□□ -0.65
VTI1A-203ENST00000472892 GALR1P47211 349 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 MEOX2P50222 304 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 PSG9Q00887 426 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 EBLN2Q6P2I7 272 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 BPIFCQ8NFQ6 507 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 OR4B1Q8NGF8 309 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 OR4D5Q8NGN0 318 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 SLC25A32Q9H2D1 315 aa10.96□□□□□ -0.65
VTI1A-203ENST00000472892 A0A0J9YX75 114 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 F6UB75 175 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 SPART-AS1P0CW21 52 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 ORM2P19652 201 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 FAM78BQ5VT40 261 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 TMEM144Q7Z5S9 345 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 C16orf92Q96LL3 132 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 C20orf173Q96LM9 149 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 RSG1Q9BU20 258 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 SLC35B3Q9H1N7 401 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 SLC25A22Q9H936 323 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 RPRMQ9NS64 109 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 FLVCR2Q9UPI3 526 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 DNAH6Q9C0G6 4158 aa10.95□□□□□ -0.66
VTI1A-203ENST00000472892 PMS2P5A8MQ11 134 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 H3BP45 60 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 AMBPP02760 352 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 S100A7P31151 101 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 POLR2GP62487 172 aaKnown RBP eCLIP10.94□□□□□ -0.66
VTI1A-203ENST00000472892 AKR1C1Q04828 323 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 ACOT7LQ6ZUV0 252 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 OR1B1Q8NGR6 318 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 GPR82Q96P67 336 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 RFNGQ9Y644 331 aa10.94□□□□□ -0.66
VTI1A-203ENST00000472892 IGHV3OR16-12A0A075B7B8 117 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 A8MTW9 85 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 OR4E1P0C645 316 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 INPP1P49441 399 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 EMP1P54849 157 aa10.93□□□□□ -0.66
VTI1A-203ENST00000472892 TRIQKQ629K1 86 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms