RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 KRTAP4-8Q9BYQ9 185 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 VCX3BQ9H321 246 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 CACNG5Q9UF02 275 aa6.48□□□□□ -1.37
VCL-204ENST00000472585 APOA1P02647 267 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 DEFB130BP0DP73 79 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 DEFB130AP0DP74 79 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 PRB4P10163 310 aaPredicted RBP6.47□□□□□ -1.37
VCL-204ENST00000472585 PSMB3P49720 205 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 DLK1P80370 383 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 GAMTQ14353 236 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 CLINT1Q14677 625 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 IGFL4Q6B9Z1 124 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 TERB2Q8NHR7 220 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 RNF141Q8WVD5 230 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 IGF2BP2-AS1Q96M15 143 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 ABHD1Q96SE0 405 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 C7orf50Q9BRJ6 194 aaKnown RBP6.47□□□□□ -1.37
VCL-204ENST00000472585 PBDC1Q9BVG4 233 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 PRR13Q9NZ81 148 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 GOLT1BQ9Y3E0 138 aa6.47□□□□□ -1.37
VCL-204ENST00000472585 IGKV1OR2-108A0A075B7D4 117 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 TRAV8-2A0A0B4J237 113 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 TEX13DA0A0J9YY54 714 aaPredicted RBP6.46□□□□□ -1.38
VCL-204ENST00000472585 CEBPZOSA8MTT3 80 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 F5H768 121 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 M0R2Z0 102 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 SCGB2A1O75556 95 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 ID1P41134 155 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 XGP55808 180 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 NCS1P62166 190 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 KLF9Q13886 244 aaPredicted RBP6.46□□□□□ -1.38
VCL-204ENST00000472585 RNASE10Q5GAN6 216 aaKnown RBP6.46□□□□□ -1.38
VCL-204ENST00000472585 FAAP20Q6NZ36 180 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 ARRDC1Q8N5I2 433 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 SYT8Q8NBV8 401 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 UHRF2Q96PU4 802 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 MAGT1Q9H0U3 335 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 Q9H8V8 135 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 MDFICQ9P1T7 246 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 COPZ2Q9P299 210 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 MTFP1Q9UDX5 166 aa6.46□□□□□ -1.38
VCL-204ENST00000472585 SMIM31A0A1B0GVY4 71 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 LYRM9A8MSI8 78 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 ISLRO14498 428 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 GSTZ1O43708 216 aaPredicted RBP6.45□□□□□ -1.38
VCL-204ENST00000472585 ATG12O94817 140 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 IFNA5P01569 189 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 SMR3BP02814 79 aaPredicted RBP6.45□□□□□ -1.38
VCL-204ENST00000472585 ALDH3B2P48448 385 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 SUPT4H1P63272 117 aaKnown RBP6.45□□□□□ -1.38
VCL-204ENST00000472585 OR2F1Q13607 317 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 SPINK13Q1W4C9 94 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 SERTAD4-AS1Q5TG53 156 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 OR8G2PQ6IF36 304 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 ETFRF1Q6IPR1 90 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 TMEM182Q6ZP80 229 aaPredicted RBP6.45□□□□□ -1.38
VCL-204ENST00000472585 SSX7Q7RTT5 188 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 FAM219AQ8IW50 185 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 OR11H7Q8NGC8 314 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 COQ8AQ8NI60 647 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 ZFAND1Q8TCF1 268 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 RBPMSQ93062 196 aaKnown RBP6.45□□□□□ -1.38
VCL-204ENST00000472585 TMEM56-RWDD3S4R434 201 aa6.45□□□□□ -1.38
VCL-204ENST00000472585 TRAV12-2A0A075B6T6 113 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 CNN1P51911 297 aaKnown RBP6.44□□□□□ -1.38
VCL-204ENST00000472585 LYZP61626 148 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 VBP1P61758 197 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 SCGB2B2Q4G0G5 96 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 C1orf194Q5T5A4 169 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 TMEM268Q5VZI3 342 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 SPATA31B1PQ5VZV4 182 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 EBLN2Q6P2I7 272 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 BAP18Q8IXM2 172 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 RNF182Q8N6D2 247 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 RNASE11Q8TAA1 199 aaKnown RBP6.44□□□□□ -1.38
VCL-204ENST00000472585 RSG1Q9BU20 258 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 SLC25A32Q9H2D1 315 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 RBKSQ9H477 322 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 NAA60Q9H7X0 242 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 DOK5Q9P104 306 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 GPR132Q9UNW8 380 aa6.44□□□□□ -1.38
VCL-204ENST00000472585 VPS13BQ7Z7G8 4022 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 CBY3A6NI87 242 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 CRYM-AS1A6NIL9 109 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 RGS13O14921 159 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 ATP6V1G2O95670 118 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 RAB3DO95716 219 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 GATA2P23769 480 aaPredicted RBP6.43□□□□□ -1.38
VCL-204ENST00000472585 TSPOP30536 169 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 ESRGQ1W209 222 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 Q6ZSN1 163 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 CCDC71LQ8N9Z2 235 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 TMEM229BQ8NBD8 167 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 TMEM208Q9BTX3 173 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 Q9H3A6 140 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 RPRMQ9NS64 109 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 HSPB7Q9UBY9 170 aa6.43□□□□□ -1.38
VCL-204ENST00000472585 A0A1W2PPQ1 181 aa6.42□□□□□ -1.38
VCL-204ENST00000472585 ZFP92A6NM28 416 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms