RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ZNF546Q86UE3 836 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 GBGT1Q8N5D6 347 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 GLMPQ8WWB7 406 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 TMEM147Q9BVK8 224 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 ZMAT4Q9H898 229 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 SRD5A3Q9H8P0 318 aa10.61□□□□□ -0.71
BRCA1-211ENST00000472490 ORM2P19652 201 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 RAP2BP61225 183 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 OXA1LQ15070 435 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 PXDC1Q5TGL8 231 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 SIGLEC15Q6ZMC9 328 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 WFDC3Q8IUB2 231 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 SBSPONQ8IVN8 264 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 STXBP6Q8NFX7 210 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 OR1B1Q8NGR6 318 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 ASB13Q8WXK3 278 aa10.6□□□□□ -0.71
BRCA1-211ENST00000472490 IGSF23A1L1A6 192 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 HYPMO75409 117 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 MPC2O95563 127 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 LINC00869P0C866 280 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 PLP1P60201 277 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 VWC2Q2TAL6 325 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 OR8I2Q8N0Y5 310 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 ASCL2Q99929 193 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 NRN1Q9NPD7 142 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 OR5AC2Q9NZP5 309 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 UBQLN2Q9UHD9 624 aa10.59□□□□□ -0.71
BRCA1-211ENST00000472490 LOC102724200A0A096LPH7 203 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-211ENST00000472490 AGPAT2O15120 278 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 MPDU1O75352 247 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 GATA2P23769 480 aaPredicted RBP10.58□□□□□ -0.72
BRCA1-211ENST00000472490 SNRPD3P62318 126 aaKnown RBP10.58□□□□□ -0.72
BRCA1-211ENST00000472490 EWSR1Q01844 656 aaKnown RBP eCLIP10.58□□□□□ -0.72
BRCA1-211ENST00000472490 FGL1Q08830 312 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 ODF3L2Q3SX64 289 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 SAMD13Q5VXD3 122 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 Q6ZRG5 221 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 STPG3Q8N7X2 389 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 THAP6Q8TBB0 222 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 GPR82Q96P67 336 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 WFDC10AQ9H1F0 79 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 HIGD1AQ9Y241 93 aa10.58□□□□□ -0.72
BRCA1-211ENST00000472490 ELOA3CA0A087WX78 387 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-211ENST00000472490 H0YIZ8 118 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 K7EQG2 157 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 OR5G3P0C626 314 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 CXCL3P19876 107 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 GALR1P47211 349 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 CAMLGP49069 296 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 HAGHQ16775 308 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 LINC00322Q6ZN03 302 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-211ENST00000472490 TMEM182Q6ZP80 229 aaPredicted RBP10.57□□□□□ -0.72
BRCA1-211ENST00000472490 OR5C1Q8NGR4 320 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 DCANP1Q8TF63 244 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 SPATA25Q9BR10 227 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 GGTLC1Q9BX51 225 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 MAP6D1Q9H9H5 199 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 SEPSECSQ9HD40 501 aaKnown RBP10.57□□□□□ -0.72
BRCA1-211ENST00000472490 WDR83OSQ9Y284 106 aa10.57□□□□□ -0.72
BRCA1-211ENST00000472490 SORL1Q92673 2214 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 UBE2L5PA0A1B0GUS4 154 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 RBMY1BA6NDE4 496 aaKnown RBP10.56□□□□□ -0.72
BRCA1-211ENST00000472490 RBMY1EA6NEQ0 496 aaKnown RBP10.56□□□□□ -0.72
BRCA1-211ENST00000472490 ZNF98A6NK75 572 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 RBMY1DP0C7P1 496 aaKnown RBP10.56□□□□□ -0.72
BRCA1-211ENST00000472490 APOC4P55056 127 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 NHLH2Q02577 135 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 FCN2Q15485 313 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 OR11H7Q8NGC8 314 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 CHAC2Q8WUX2 184 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 MGST2Q99735 147 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 TM2D3Q9BRN9 247 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 RNF126Q9BV68 326 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 ARL6Q9H0F7 186 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 SLC25A22Q9H936 323 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 DOK5Q9P104 306 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 U3KQK5 164 aa10.56□□□□□ -0.72
BRCA1-211ENST00000472490 GIPP09681 153 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-211ENST00000472490 RPL7P18124 248 aaKnown RBP10.55□□□□□ -0.72
BRCA1-211ENST00000472490 RPL12P30050 165 aaKnown RBP10.55□□□□□ -0.72
BRCA1-211ENST00000472490 ID1P41134 155 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 MEOX2P50222 304 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 DEFB131AP59861 70 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 APRG1Q8IVJ8 170 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 SHANK2-AS3Q9BTD1 123 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 SLC25A39Q9BZJ4 359 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-211ENST00000472490 ARV1Q9H2C2 271 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 KCNIP2Q9NS61 270 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 MBD2Q9UBB5 411 aa10.55□□□□□ -0.72
BRCA1-211ENST00000472490 KIR2DL5BA0A0G2JN68 375 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 KIR2DL5BA0A0G2JPC4 375 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 UBE2CO00762 179 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 COX7A2P2O60397 106 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 LYL1P12980 280 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 FGF7P21781 194 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 RPL29P47914 159 aaKnown RBP10.54□□□□□ -0.72
BRCA1-211ENST00000472490 KIR2DL5AQ8N109 375 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 ZNF709Q8N972 641 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 OR1L4Q8NGR5 311 aa10.54□□□□□ -0.72
BRCA1-211ENST00000472490 KIR2DL5BQ8NHK3 375 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms