RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 IGHV3-66A0A0C4DH42 116 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 M6PRP20645 277 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 REC114Q7Z4M0 266 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 SPATA3Q8NHX4 192 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 RABAC1Q9UI14 185 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 SELENOKQ9Y6D0 94 aa14.63□□□□□ -0.07
PSPC1-203ENST00000471658 LGALS9O00182 355 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 PF4P02776 101 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 FHITP49789 147 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 IFITM2Q01629 132 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 ACOT6Q3I5F7 207 aaPredicted RBP14.62□□□□□ -0.07
PSPC1-203ENST00000471658 AKR1C8PQ5T2L2 129 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 C10orf113Q5VZT2 155 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 LEMD1Q68G75 181 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 FAM122CQ6P4D5 195 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 TEX261Q6UWH6 196 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 RPP25LQ8N5L8 163 aaKnown RBP14.62□□□□□ -0.07
PSPC1-203ENST00000471658 OR10G4Q8NGN3 311 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 OR10G9Q8NGN4 311 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 OR10G7Q8NGN6 311 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 SEPSECSQ9HD40 501 aaKnown RBP14.62□□□□□ -0.07
PSPC1-203ENST00000471658 HIGD1AQ9Y241 93 aa14.62□□□□□ -0.07
PSPC1-203ENST00000471658 TRAV5A0A0B4J249 113 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 TMEM213A2RRL7 107 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 TMEM41BQ5BJD5 291 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 PXDC1Q5TGL8 231 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 LINC00305Q7Z4B0 112 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 OR4F17Q8NGA8 305 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 OR1L4Q8NGR5 311 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 OR4F4Q96R69 305 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 UFC1Q9Y3C8 167 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 WNK1Q9H4A3 2382 aa14.61□□□□□ -0.07
PSPC1-203ENST00000471658 NPPCP23582 126 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 FAM78BQ5VT40 261 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 IL34Q6ZMJ4 242 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 ADAMTSL5Q6ZMM2 481 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 MIR17HGQ75NE6 70 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 SSX7Q7RTT5 188 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 ZNF680Q8NEM1 530 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 GATAD1Q8WUU5 269 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 PHYHIPLQ96FC7 376 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 METTL26Q96S19 204 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 SCRT1Q9BWW7 348 aa14.6□□□□□ -0.07
PSPC1-203ENST00000471658 SLC25A39Q9BZJ4 359 aaPredicted RBP14.6□□□□□ -0.07
PSPC1-203ENST00000471658 ELOA3CA0A087WX78 387 aaPredicted RBP14.59□□□□□ -0.07
PSPC1-203ENST00000471658 K7EMT4 169 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 OVOL1O14753 267 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 CRYBB3P26998 211 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 ZNF726P1Q15940 193 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 EIF5AL1Q6IS14 154 aaKnown RBP14.59□□□□□ -0.07
PSPC1-203ENST00000471658 LINC00482Q8N8I6 264 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 OR9G4Q8NGQ1 327 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 DAZ1Q9NQZ3 744 aaKnown RBP14.59□□□□□ -0.07
PSPC1-203ENST00000471658 U3KQE9 123 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 C2orf70A6NJV1 201 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 A8MWP6 167 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 HMGB3O15347 200 aaKnown RBP14.59□□□□□ -0.07
PSPC1-203ENST00000471658 MBP02144 154 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 SULT1A2P50226 295 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 PFDN5Q99471 154 aa14.59□□□□□ -0.07
PSPC1-203ENST00000471658 IGHV7-4-1A0A0J9YVY3 117 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 H3BRN7 92 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 FAM213BQ8TBF2 198 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 SHANK2-AS3Q9BTD1 123 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 SLC25A22Q9H936 323 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 SMPXQ9UHP9 88 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 FUT9Q9Y231 359 aa14.58□□□□□ -0.08
PSPC1-203ENST00000471658 ZNF98A6NK75 572 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 UMAD1C9J7I0 102 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 CSN3P07498 182 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 FOLR2P14207 255 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 RHPN1-AS1Q9BWJ2 59 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 VWFP04275 2813 aa14.57□□□□□ -0.08
PSPC1-203ENST00000471658 A0A1W2PPV4 95 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 CHEK1O14757 476 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 BUB3O43684 328 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 CBLN1P23435 193 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 CDC34P49427 236 aaPredicted RBP14.56□□□□□ -0.08
PSPC1-203ENST00000471658 RHOBP62745 196 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 PCNPQ8WW12 178 aaKnown RBP14.56□□□□□ -0.08
PSPC1-203ENST00000471658 RAB24Q969Q5 203 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 PEMTQ9UBM1 199 aa14.56□□□□□ -0.08
PSPC1-203ENST00000471658 SEC14L6B5MCN3 397 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 ELOVL1Q9BW60 279 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 ACTR3CQ9C0K3 210 aaPredicted RBP14.55□□□□□ -0.08
PSPC1-203ENST00000471658 TRRAPQ9Y4A5 3859 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 M0QZ24 198 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 SNRPCP09234 159 aaKnown RBP14.55□□□□□ -0.08
PSPC1-203ENST00000471658 C8orf88P0DMB2 117 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 FAM167A-AS1Q96KT0 104 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 SLC25A2Q9BXI2 301 aa14.55□□□□□ -0.08
PSPC1-203ENST00000471658 IFNA7P01567 189 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 C16orf54Q6UWD8 224 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 LCN15Q6UWW0 184 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 RNF2Q99496 336 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 MRPL32Q9BYC8 188 aaKnown RBP14.54□□□□□ -0.08
PSPC1-203ENST00000471658 MLXQ9UH92 298 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 ANK2Q01484 3957 aa14.54□□□□□ -0.08
PSPC1-203ENST00000471658 RAB5CP51148 216 aa14.53□□□□□ -0.08
PSPC1-203ENST00000471658 FGF8P55075 233 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms