RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 TEX261Q6UWH6 196 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 MIR17HGQ75NE6 70 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 C1QL4Q86Z23 238 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 LYPD6BQ8NI32 183 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 TMED6Q8WW62 240 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SHANK2-AS3Q9BTD1 123 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF471Q9BX82 626 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-207ENST00000471342 GAR1Q9NY12 217 aaKnown RBP7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SIGLEC8Q9NYZ4 499 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 MLXQ9UH92 298 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 SMPXQ9UHP9 88 aa7.46□□□□□ -1.22
SF3A1-207ENST00000471342 IGHV7-4-1A0A0J9YVY3 117 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 KANTRA0A1W2PQU2 76 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 IFNA5P01569 189 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 CBLN1P23435 193 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 NUP62P37198 522 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-207ENST00000471342 SULT1A2P50226 295 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 ELLP55199 621 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-207ENST00000471342 LEMD1Q68G75 181 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 C16orf54Q6UWD8 224 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 C12orf54Q6X4T0 127 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF680Q8NEM1 530 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 OR9G4Q8NGQ1 327 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 MBD3L1Q8WWY6 194 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 SLC25A2Q9BXI2 301 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 KRTAP3-3Q9BYR6 98 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 KRTAP3-2Q9BYR7 98 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 SLC25A39Q9BZJ4 359 aaPredicted RBP7.45□□□□□ -1.22
SF3A1-207ENST00000471342 DOK5Q9P104 306 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 SELENOKQ9Y6D0 94 aa7.45□□□□□ -1.22
SF3A1-207ENST00000471342 IGHV3OR16-13A0A075B7E8 117 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 IGHV3-49A0A0A0MS15 119 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 BORCS7-ASMTA0A0B4J1R7 106 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 IGHV3-74A0A0B4J1X5 117 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 IZUMO1RA6ND01 250 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF98A6NK75 572 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 H3BQ15 152 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 SOCS3O14543 225 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 NDUFB4O95168 129 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 IGLC2P0DOY2 106 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 TPT1P13693 172 aaKnown RBP7.44□□□□□ -1.22
SF3A1-207ENST00000471342 FOLR2P14207 255 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 GP9P14770 177 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 M6PRP20645 277 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 CCL20P78556 96 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 RELQ04864 619 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-207ENST00000471342 FFAR4Q5NUL3 377 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 ALKAL2Q6UX46 152 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 Q8WTZ3 238 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 GNPNAT1Q96EK6 184 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-207ENST00000471342 SAT2Q96F10 170 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-207ENST00000471342 PHYHIPLQ96FC7 376 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 RNF2Q99496 336 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 DNAJC4Q9NNZ3 241 aa7.44□□□□□ -1.22
SF3A1-207ENST00000471342 TRAV8-2A0A0B4J237 113 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF785A8K8V0 405 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 HYPMO75409 117 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 STAG3L2P0CL84 134 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 STAG3L3P0CL85 134 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 ORM2P19652 201 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 ZP3P21754 424 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 LYZP61626 148 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 RPEL1Q2QD12 228 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 DEFB114Q30KQ6 69 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 KHDC1LQ5JSQ8 128 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 LINC00305Q7Z4B0 112 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 C3orf56Q8N813 242 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 SCGB1C1Q8TD33 95 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 GATAD1Q8WUU5 269 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 RAB24Q969Q5 203 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 FXYD5Q96DB9 178 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 C19orf73Q9NVV2 129 aa7.43□□□□□ -1.22
SF3A1-207ENST00000471342 IGHV3-66A0A0C4DH42 116 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 OVOL1O14753 267 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 IGLV1-51P01701 117 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 NMBP08949 121 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 TMEM41BQ5BJD5 291 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 PXDC1Q5TGL8 231 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 FAM24BQ8N5W8 94 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 OR1B1Q8NGR6 318 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 DCANP1Q8TF63 244 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 PCNPQ8WW12 178 aaKnown RBP7.42□□□□□ -1.22
SF3A1-207ENST00000471342 RHPN1-AS1Q9BWJ2 59 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 DAZ1Q9NQZ3 744 aaKnown RBP7.42□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF586Q9NXT0 402 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 FUT9Q9Y231 359 aa7.42□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF256Q9Y2P7 627 aaPredicted RBP7.42□□□□□ -1.22
SF3A1-207ENST00000471342 ELOA3CA0A087WX78 387 aaPredicted RBP7.41□□□□□ -1.22
SF3A1-207ENST00000471342 TRAV1-1A0A0B4J248 108 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 ZNF320A2RRD8 509 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 RGS13O14921 159 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 PYYP10082 97 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 FAM106AQ4KMX7 169 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 OR10G4Q8NGN3 311 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 OR10G9Q8NGN4 311 aa7.41□□□□□ -1.22
SF3A1-207ENST00000471342 OR10G7Q8NGN6 311 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms