RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 PLET1Q6UQ28 207 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 PDPNQ86YL7 162 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 ZNF695Q8IW36 515 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 SGPP2Q8IWX5 399 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CMTM1Q8IZ96 169 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 PUSL1Q8N0Z8 303 aaKnown RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 C12orf45Q8N5I9 185 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 CCDC71LQ8N9Z2 235 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 LFNGQ8NES3 379 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR5T1Q8NG75 326 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR2T10Q8NGZ9 312 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR4S2Q8NH73 311 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 ZFAND1Q8TCF1 268 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 ZNF431Q8TF32 576 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 MITD1Q8WV92 249 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 FLYWCH2Q96CP2 140 aaKnown RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 AKR1E2Q96JD6 320 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR5B12Q96R08 314 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR4C12Q96R67 309 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 KIR2DL4Q99706 377 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 HSD17B10Q99714 261 aaKnown RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 SLC25A21Q9BQT8 299 aaPredicted RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 C7orf50Q9BRJ6 194 aaKnown RBP2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR51J1Q9H342 316 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 PALMDQ9NP74 551 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 OR5AC2Q9NZP5 309 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 GSKIPQ9P0R6 139 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
COL9A1-206ENST00000470652 IGHV3OR16-8A0A075B7F1 116 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 IGLC7A0M8Q6 106 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 C5orf51A6NDU8 294 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 MFSD2BA6NFX1 497 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 ZFP92A6NM28 416 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TCF21O43680 179 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SSNA1O43805 119 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SSSCA1O60232 199 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 ATP6V1G1O75348 118 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 EIF3GO75821 320 aaKnown RBP eCLIP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 OR2A4O95047 310 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 HPRT1P00492 218 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TRBV12-3P01733 135 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 IGHV3-11P01762 117 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 IL5P05113 134 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SULT1A3P0DMM9 295 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SULT1A4P0DMN0 295 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 PRB4P10163 310 aaPredicted RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 CD28P10747 220 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 HLA-GP17693 338 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 HNF1AP20823 631 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 BRS3P32247 399 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 UBE2KP61086 200 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM267Q0VDI3 215 aaPredicted RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 CATR1Q13166 79 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 FXYD3Q14802 87 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SURF2Q15527 256 aaPredicted RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 DEFB136Q30KP8 78 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM128Q5BJH2 165 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 FAM71F2Q6NXP2 309 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 ADAMTSL5Q6ZMM2 481 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 H2BFWTQ7Z2G1 175 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 PPP1R27Q86WC6 154 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 LGI3Q8N145 548 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 NPBQ8NG41 125 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 OR4C13Q8NGP0 309 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 RNASE11Q8TAA1 199 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM167AQ8TBQ9 72 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 RNASE8Q8TDE3 154 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 SRSF12Q8WXF0 261 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 ARPC1AQ92747 370 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 RBPMSQ93062 196 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 GALNT14Q96FL9 552 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM56Q96MV1 263 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 OR2A7Q96R45 310 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 C19orf24Q9BVV8 132 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 RBKSQ9H477 322 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 RCL1Q9Y2P8 373 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 PRELID3BQ9Y3B1 194 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 LSM5Q9Y4Y9 91 aaKnown RBP2.77□□□□□ -1.97
COL9A1-206ENST00000470652 OR51B2Q9Y5P1 312 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 TMEM56-RWDD3S4R434 201 aa2.77□□□□□ -1.97
COL9A1-206ENST00000470652 DNAH9Q9NYC9 4486 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 A0A0B4J2A0 478 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 IGSF23A1L1A6 192 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 FAM24AA6NFZ4 105 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 OOSP1A8MZH6 123 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 BOLA2-SMG1P6H3BVE0 249 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 K7EPK0 472 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 WRBO00258 174 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RBFOX2O43251 390 aaKnown RBP eCLIP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 CREBL2O60519 120 aaPredicted RBP2.76□□□□□ -1.97
COL9A1-206ENST00000470652 PITX3O75364 302 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 OR2J3O76001 311 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 SLC22A5O76082 557 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 CNIH1O95406 144 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 HLA-DRB1P01911 266 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 RRASP10301 218 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 NQO2P16083 231 aa2.76□□□□□ -1.97
COL9A1-206ENST00000470652 VDAC2P45880 294 aaPredicted RBP2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms