RNA–Protein interactions for RNA: ENST00000470338.1

TOP3B-215, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 624 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-215ENST00000470338 FBXL17Q9UF56 701 aa10.4□□□□□ -0.74
TOP3B-215ENST00000470338 SLC45A2Q9UMX9 530 aa10.4□□□□□ -0.74
TOP3B-215ENST00000470338 STARD9Q9P2P6 4700 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 SMCO3A2RU48 225 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 GATA2P23769 480 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-215ENST00000470338 ARL16Q0P5N6 197 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 CYP2G1PQ6ZSU1 146 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 MARVELD1Q9BSK0 173 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 GGACTQ9BVM4 153 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 GPN1Q9HCN4 374 aaPredicted RBP10.39□□□□□ -0.75
TOP3B-215ENST00000470338 LSM5Q9Y4Y9 91 aaKnown RBP10.39□□□□□ -0.75
TOP3B-215ENST00000470338 TENM2Q9NT68 2774 aa10.39□□□□□ -0.75
TOP3B-215ENST00000470338 INMT-MINDY4F8WBC2 141 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 L7N2F9 121 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 PRAF2O60831 178 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 DEDDO75618 318 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 DEFA1P59665 94 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 DEFA3P59666 94 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 RRAS2P62070 204 aaPredicted RBP10.38□□□□□ -0.75
TOP3B-215ENST00000470338 SELENOTP62341 195 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 VAMP2P63027 116 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 TRPT1Q86TN4 253 aaKnown RBP10.38□□□□□ -0.75
TOP3B-215ENST00000470338 STHQ8IWL8 128 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 MGAT4CQ9UBM8 478 aa10.38□□□□□ -0.75
TOP3B-215ENST00000470338 ZNF98A6NK75 572 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 ORM2P19652 201 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 PLP1P60201 277 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
TOP3B-215ENST00000470338 RAB32Q13637 225 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 PSMG4Q5JS54 123 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 TEPPQ6URK8 271 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 OR8I2Q8N0Y5 310 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 PPP1R14BQ96C90 147 aa10.37□□□□□ -0.75
TOP3B-215ENST00000470338 KNCNA6PVL3 124 aa10.36□□□□□ -0.75
TOP3B-215ENST00000470338 PVALBP20472 110 aaPredicted RBP10.36□□□□□ -0.75
TOP3B-215ENST00000470338 OR1B1Q8NGR6 318 aa10.36□□□□□ -0.75
TOP3B-215ENST00000470338 IL17DQ8TAD2 202 aa10.36□□□□□ -0.75
TOP3B-215ENST00000470338 GATAD1Q8WUU5 269 aa10.36□□□□□ -0.75
TOP3B-215ENST00000470338 TMEM147Q9BVK8 224 aa10.36□□□□□ -0.75
TOP3B-215ENST00000470338 FAM24AA6NFZ4 105 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 SOCS3O14543 225 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 GIG44P09565 113 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-215ENST00000470338 S100A7P31151 101 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 BCAP31P51572 246 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 CAV2P51636 162 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 ACTL10Q5JWF8 245 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 ZFAND6Q6FIF0 208 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 SLC25A32Q9H2D1 315 aa10.35□□□□□ -0.75
TOP3B-215ENST00000470338 LYRM2Q9NU23 88 aaPredicted RBP10.35□□□□□ -0.75
TOP3B-215ENST00000470338 DYNC2H1Q8NCM8 4307 aaKnown RBP10.34□□□□□ -0.75
TOP3B-215ENST00000470338 HYPMO75409 117 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 CST7O76096 145 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 SIX6O95475 246 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 CA1P00915 261 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-215ENST00000470338 LINC00869P0C866 280 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 SPP1P10451 314 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 ID1P41134 155 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 PSMB3P49720 205 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 S100A10P60903 97 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 SLC38A11Q08AI6 406 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 TMEM41BQ5BJD5 291 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 MORN3Q6PF18 240 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-215ENST00000470338 C17orf77Q96MU5 243 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 GPR82Q96P67 336 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 SLC25A39Q9BZJ4 359 aaPredicted RBP10.34□□□□□ -0.75
TOP3B-215ENST00000470338 NMES1Q9C002 83 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 SLC25A22Q9H936 323 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 HIGD1AQ9Y241 93 aa10.34□□□□□ -0.75
TOP3B-215ENST00000470338 A0A0J9YWU9 116 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 IGSF23A1L1A6 192 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 H3BRN7 92 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 ISLRO14498 428 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 GOSR2O14653 212 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 AGPAT2O15120 278 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
TOP3B-215ENST00000470338 GALR1P47211 349 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 MEOX2P50222 304 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 SULT1A1P50225 295 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 RAP2BP61225 183 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 VWC2Q2TAL6 325 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 PXDC1Q5TGL8 231 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 SAMD13Q5VXD3 122 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 PATE2Q6UY27 113 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 TMEM252Q8N6L7 170 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 RARRES2Q99969 163 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 SHANK2-AS3Q9BTD1 123 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 RSG1Q9BU20 258 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 DOK5Q9P104 306 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 LYSTQ99698 3801 aa10.33□□□□□ -0.76
TOP3B-215ENST00000470338 H3BMM0 161 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 OR5G3P0C626 314 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 S100A11P31949 105 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 CYCSP99999 105 aaKnown RBP10.32□□□□□ -0.76
TOP3B-215ENST00000470338 ZNF546Q86UE3 836 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 TMEM217Q8N7C4 229 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 OR11H2Q8NH07 326 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 MGST2Q99735 147 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 SCRT1Q9BWW7 348 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 ARL6Q9H0F7 186 aa10.32□□□□□ -0.76
TOP3B-215ENST00000470338 WDR83OSQ9Y284 106 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 168.7 ms