RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 PARD6GQ9BYG4 376 aaPredicted RBP7.96□□□□□ -1.14
SMC1A-206ENST00000470241 DOK5Q9P104 306 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 PXMP4Q9Y6I8 212 aa7.96□□□□□ -1.14
SMC1A-206ENST00000470241 PKD1L1Q8TDX9 2849 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 A0A1W2PS18 150 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 BUB3O43684 328 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 HYPMO75409 117 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 B2MP61769 119 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF266Q14584 549 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF345Q14585 488 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 FAM90A2PQ658T7 463 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 C16orf54Q6UWD8 224 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 TMEM61Q8N0U2 210 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 KCNRGQ8N5I3 272 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 OR2K2Q8NGT1 345 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 SCGB1C1Q8TD33 95 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 GLMPQ8WWB7 406 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 TMEM37Q8WXS4 190 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 RSG1Q9BU20 258 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 ARL6Q9H0F7 186 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 CYTL1Q9NRR1 136 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 SLC39A9Q9NUM3 307 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 DNAH3Q8TD57 4116 aa7.95□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF785A8K8V0 405 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 OR5G3P0C626 314 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 BMI1P35226 326 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 PXDC1Q5TGL8 231 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 RPL7L1Q6DKI1 246 aaKnown RBP7.94□□□□□ -1.14
SMC1A-206ENST00000470241 TCF24Q7RTU0 167 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 NARS2Q96I59 477 aaKnown RBP7.94□□□□□ -1.14
SMC1A-206ENST00000470241 SHANK2-AS3Q9BTD1 123 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 SCRT1Q9BWW7 348 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 SLC25A39Q9BZJ4 359 aaPredicted RBP7.94□□□□□ -1.14
SMC1A-206ENST00000470241 ARV1Q9H2C2 271 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 TMEM231Q9H6L2 316 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 HIGD1AQ9Y241 93 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 RFNGQ9Y644 331 aa7.94□□□□□ -1.14
SMC1A-206ENST00000470241 TRAV25A0A0B4J276 109 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 A0A0D9SG52 128 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF98A6NK75 572 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 C17orf112F2Z3M2 114 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 H3BRN7 92 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 TAAR5O14804 337 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 TSPAN4O14817 238 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 COX7A2P2O60397 106 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 LGALSLQ3ZCW2 172 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-206ENST00000470241 GCSAMLQ5JQS6 135 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 LAMTOR1Q6IAA8 161 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 LCN12Q6JVE5 192 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 Q6ZRG5 221 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 RBPMS2Q6ZRY4 209 aaKnown RBP7.93□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF709Q8N972 641 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 PPP1R14BQ96C90 147 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 GRAMD2BQ96HH9 432 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 HYLS1Q96M11 299 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 UHRF2Q96PU4 802 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 ARPC5LQ9BPX5 153 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 DNAJC4Q9NNZ3 241 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 KCNIP2Q9NS61 270 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 PFDN2Q9UHV9 154 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 ZNF256Q9Y2P7 627 aaPredicted RBP7.93□□□□□ -1.14
SMC1A-206ENST00000470241 TIMM9Q9Y5J7 89 aa7.93□□□□□ -1.14
SMC1A-206ENST00000470241 ELOA3CA0A087WX78 387 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-206ENST00000470241 PRB2P02812 416 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-206ENST00000470241 GP9P14770 177 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 GUCA2BQ16661 112 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 C1orf194Q5T5A4 169 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 MORN5Q5VZ52 161 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 C10orf113Q5VZT2 155 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 LEMD1Q68G75 181 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 TMUB2Q71RG4 321 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 LINC00305Q7Z4B0 112 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 HSD17B11Q8NBQ5 300 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 OR1L4Q8NGR5 311 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 PRR25Q96S07 402 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 SPAG8Q99932 426 aaPredicted RBP7.92□□□□□ -1.14
SMC1A-206ENST00000470241 SLC25A32Q9H2D1 315 aa7.92□□□□□ -1.14
SMC1A-206ENST00000470241 ZMAT5Q9UDW3 170 aaKnown RBP7.92□□□□□ -1.14
SMC1A-206ENST00000470241 IGKV3-7A0A075B6H7 116 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 BORCS7-ASMTA0A0B4J1R7 106 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 HELTA6NFD8 242 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 BCL2L11O43521 198 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 JTBO76095 146 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 CD5P06127 495 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 S100A7P31151 101 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 ZFP69Q49AA0 526 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 FFAR4Q5NUL3 377 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 SIGLEC15Q6ZMC9 328 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 OR8I2Q8N0Y5 310 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 GATAD1Q8WUU5 269 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 C17orf77Q96MU5 243 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 PFDN5Q99471 154 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 PSMG3Q9BT73 122 aaPredicted RBP7.91□□□□□ -1.14
SMC1A-206ENST00000470241 SH3BGRL3Q9H299 93 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 SLC25A22Q9H936 323 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 AURKAIP1Q9NWT8 199 aaPredicted RBP7.91□□□□□ -1.14
SMC1A-206ENST00000470241 SMAD5-AS1Q9Y6J3 95 aa7.91□□□□□ -1.14
SMC1A-206ENST00000470241 TRAV5A0A0B4J249 113 aa7.9□□□□□ -1.14
SMC1A-206ENST00000470241 KANTRA0A1W2PQU2 76 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 109.5 ms