RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 KRTAP4-2Q9BYR5 136 aa6.33□□□□□ -1.4
CCDC171-204ENST00000470191 Q9H3A6 140 aa6.33□□□□□ -1.4
CCDC171-204ENST00000470191 PTTG2Q9NZH5 202 aa6.33□□□□□ -1.4
CCDC171-204ENST00000470191 DOK5Q9P104 306 aa6.33□□□□□ -1.4
CCDC171-204ENST00000470191 CBY3A6NI87 242 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 SOCS3O14543 225 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 PAX4O43316 350 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 INSP01308 110 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 BTF3P20290 206 aaKnown RBP6.32□□□□□ -1.4
CCDC171-204ENST00000470191 LINC00315P59091 139 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 ZNF90Q03938 601 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 MEF2DQ14814 521 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 C2orf83Q53S99 150 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 SPATA31B1PQ5VZV4 182 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 ETFRF1Q6IPR1 90 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 AMTNQ6UX39 209 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 IZUMO2Q6UXV1 221 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 OR8I2Q8N0Y5 310 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 SLC24A4Q8NFF2 622 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 RNASEH2CQ8TDP1 164 aaKnown RBP6.32□□□□□ -1.4
CCDC171-204ENST00000470191 TMEM170AQ8WVE7 144 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 GNPNAT1Q96EK6 184 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-204ENST00000470191 SLC25A39Q9BZJ4 359 aaPredicted RBP6.32□□□□□ -1.4
CCDC171-204ENST00000470191 PFDN2Q9UHV9 154 aa6.32□□□□□ -1.4
CCDC171-204ENST00000470191 TRAV26-1A0A087WT03 109 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 PLAC8L1A1L4L8 177 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 ZFP92A6NM28 416 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 ISLRO14498 428 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 RCVRNP35243 200 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 NUP62P37198 522 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-204ENST00000470191 GABARAPL2P60520 117 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 RND3P61587 244 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 SUPT4H1P63272 117 aaKnown RBP6.31□□□□□ -1.4
CCDC171-204ENST00000470191 ESRGQ1W209 222 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 ARRDC1Q8N5I2 433 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 OR11H7Q8NGC8 314 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 GPX8Q8TED1 209 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 LINC01587Q99440 93 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 SLC25A22Q9H936 323 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.31□□□□□ -1.4
CCDC171-204ENST00000470191 COPZ2Q9P299 210 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 CACNG5Q9UF02 275 aa6.31□□□□□ -1.4
CCDC171-204ENST00000470191 CRXO43186 299 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-204ENST00000470191 DNAH10OSP0CZ25 163 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 CNN1P51911 297 aaKnown RBP6.3□□□□□ -1.4
CCDC171-204ENST00000470191 KRTAP10-1P60331 282 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 LSM3P62310 102 aaKnown RBP6.3□□□□□ -1.4
CCDC171-204ENST00000470191 FGL1Q08830 312 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 KLF9Q13886 244 aaPredicted RBP6.3□□□□□ -1.4
CCDC171-204ENST00000470191 OR8G2PQ6IF36 304 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 RNF182Q8N6D2 247 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 C17orf77Q96MU5 243 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 RSG1Q9BU20 258 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 NOP10Q9NPE3 64 aaKnown RBP6.3□□□□□ -1.4
CCDC171-204ENST00000470191 TNFRSF18Q9Y5U5 241 aa6.3□□□□□ -1.4
CCDC171-204ENST00000470191 SMIM31A0A1B0GVY4 71 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 DUSP14O95147 198 aaKnown RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 IFNA5P01569 189 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 OR5AC1P0C628 307 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 ZNF182P17025 639 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 UCP1P25874 307 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 RPS19P39019 145 aaKnown RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 ERVFC1-1P60608 527 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 RHOBP62745 196 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 NEDD8Q15843 81 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 SCGB2B2Q4G0G5 96 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 RNASE10Q5GAN6 216 aaKnown RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 CCDC71LQ8N9Z2 235 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 LHFPL5Q8TAF8 219 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 MARCH1Q8TCQ1 289 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 ZNF486Q96H40 463 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 SLC25A32Q9H2D1 315 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 PPP1R14DQ9NXH3 145 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 COMMD3Q9UBI1 195 aa6.29□□□□□ -1.4
CCDC171-204ENST00000470191 TIMM8BQ9Y5J9 83 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 FLG2Q5D862 2391 aaPredicted RBP6.29□□□□□ -1.4
CCDC171-204ENST00000470191 IGKV1D-37A0A075B6S9 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GAGE12BA1L429 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 FAM229AH3BQW9 127 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 ZNF701M0R085 212 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GAGE7O76087 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 CD3DP04234 171 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GAGE12FP0CL80 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GAGE12GP0CL81 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GAGE12IP0CL82 117 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 M6PRP20645 277 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 HOXA5P20719 270 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 TSPOP30536 169 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GALR1P47211 349 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 ICAM4Q14773 271 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 C1orf194Q5T5A4 169 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 Q6ZRN7 208 aaPredicted RBP6.28□□□□□ -1.4
CCDC171-204ENST00000470191 GPR141Q7Z602 305 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 SELENOHQ8IZQ5 122 aaKnown RBP6.28□□□□□ -1.4
CCDC171-204ENST00000470191 ZNF738Q8NE65 137 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 OR13C8Q8NGS7 320 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 OR52E5Q8NH55 327 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 ZFAND1Q8TCF1 268 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 RXFP4Q8TDU9 374 aa6.28□□□□□ -1.4
CCDC171-204ENST00000470191 SLC35E1Q96K37 410 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms