RNA–Protein interactions for RNA: ENST00000469087.1

RUNX1-213, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 1,790 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-213ENST00000469087 STAG3L3P0CL85 134 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 UNQ9165/PRO28630Q6UXU0 137 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 SLC7A5P1Q8MH63 180 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.86□□□□□ -0.83
RUNX1-213ENST00000469087 MAP1LC3BQ9GZQ8 125 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 TMPRSS5Q9H3S3 457 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 HIGD1AQ9Y241 93 aa9.86□□□□□ -0.83
RUNX1-213ENST00000469087 C2CD3Q4AC94 2353 aa9.85□□□□□ -0.83
RUNX1-213ENST00000469087 KRTAP10-3P60369 221 aa9.85□□□□□ -0.83
RUNX1-213ENST00000469087 KHDC1LQ5JSQ8 128 aa9.85□□□□□ -0.83
RUNX1-213ENST00000469087 LEMD1Q68G75 181 aa9.85□□□□□ -0.83
RUNX1-213ENST00000469087 RNF2Q99496 336 aa9.85□□□□□ -0.83
RUNX1-213ENST00000469087 CITED2Q99967 270 aaPredicted RBP9.85□□□□□ -0.83
RUNX1-213ENST00000469087 MRPL32Q9BYC8 188 aaKnown RBP9.85□□□□□ -0.83
RUNX1-213ENST00000469087 SLC25A39Q9BZJ4 359 aaPredicted RBP9.85□□□□□ -0.83
RUNX1-213ENST00000469087 SETD2Q9BYW2 2564 aaPredicted RBP9.84□□□□□ -0.83
RUNX1-213ENST00000469087 IGHV4OR15-8A0A075B7B6 117 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 A0A087WW49 117 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 NDUFA4O00483 81 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 C8orf88P0DMB2 117 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 WFDC12Q8WWY7 111 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 ZNF503Q96F45 646 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 FAM167A-AS1Q96KT0 104 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 SLC25A2Q9BXI2 301 aa9.84□□□□□ -0.83
RUNX1-213ENST00000469087 TECRQ9NZ01 308 aaKnown RBP9.84□□□□□ -0.83
RUNX1-213ENST00000469087 HSPB1P04792 205 aaKnown RBP9.83□□□□□ -0.84
RUNX1-213ENST00000469087 ARL14EPLP0DKL9 152 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 DEFB136Q30KP8 78 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 GPHB5Q86YW7 130 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 KLHL30-AS1Q8NEE0 82 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 C4orf3Q8WVX3 66 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 C20orf24Q9BUV8 137 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 MED9Q9NWA0 146 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 JMJD1CQ15652 2540 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 ZNF320A2RRD8 509 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 H3BRN7 92 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 ZNF207O43670 478 aaKnown RBP9.83□□□□□ -0.84
RUNX1-213ENST00000469087 HBE1P02100 147 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 PRIMA1Q86XR5 153 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 OR11H1Q8NG94 326 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 MARC2Q969Z3 335 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 SCRT1Q9BWW7 348 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 RABAC1Q9UI14 185 aa9.83□□□□□ -0.84
RUNX1-213ENST00000469087 A0A1B0GUS0 222 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 A0A1W2PRX2 142 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 ZNF98A6NK75 572 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 CXorf1O96002 111 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 APOHP02749 345 aaPredicted RBP9.82□□□□□ -0.84
RUNX1-213ENST00000469087 FOXL1Q12952 345 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 RPEL1Q2QD12 228 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 C8orf86Q6ZUL3 223 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 DUX3Q96PT4 197 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
RUNX1-213ENST00000469087 TSSC4Q9Y5U2 329 aaPredicted RBP9.82□□□□□ -0.84
RUNX1-213ENST00000469087 OR7C2O60412 319 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 OR10J4P0C629 311 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 PYYP10082 97 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 NPPCP23582 126 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 HOXD3P31249 432 aaPredicted RBP9.81□□□□□ -0.84
RUNX1-213ENST00000469087 TAS2R45P59539 299 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 SRSF3P84103 164 aaKnown RBP9.81□□□□□ -0.84
RUNX1-213ENST00000469087 NDUFA5Q16718 116 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 FAM106AQ4KMX7 169 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 IL34Q6ZMJ4 242 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 PQLC2Q6ZP29 291 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 COMMD7Q86VX2 200 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 IQCF2Q8IXL9 164 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 OR1N2Q8NGR9 330 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 U3KQE9 123 aa9.81□□□□□ -0.84
RUNX1-213ENST00000469087 IGHV3OR16-13A0A075B7E8 117 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 IGHV3-49A0A0A0MS15 119 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 IGHV3-74A0A0B4J1X5 117 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 NUDT19A8MXV4 375 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 BUB3O43684 328 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 SNRPCP09234 159 aaKnown RBP9.8□□□□□ -0.84
RUNX1-213ENST00000469087 CRYBB3P26998 211 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 GCHFRP30047 84 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 TM4SF20Q53R12 229 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 KHDC3LQ587J8 217 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 TMEM190Q8WZ59 177 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 RARRES2Q99969 163 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 OR51M1Q9H341 326 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 GNG13Q9P2W3 67 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 IGHV3-66A0A0C4DH42 116 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 ADARB2-AS1A8MUL3 147 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 LINC01619G3V211 115 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 SLURP1P55000 103 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 KLF5Q13887 457 aaPredicted RBP9.8□□□□□ -0.84
RUNX1-213ENST00000469087 RAX2Q96IS3 184 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 FAM210AQ96ND0 272 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 METTL26Q96S19 204 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 PAXXQ9BUH6 204 aa9.8□□□□□ -0.84
RUNX1-213ENST00000469087 FBN1P35555 2871 aaKnown RBP9.79□□□□□ -0.84
RUNX1-213ENST00000469087 RBFOX3A6NFN3 312 aa9.79□□□□□ -0.84
RUNX1-213ENST00000469087 GP9P14770 177 aa9.79□□□□□ -0.84
RUNX1-213ENST00000469087 ZP3P21754 424 aa9.79□□□□□ -0.84
RUNX1-213ENST00000469087 PSMB3P49720 205 aa9.79□□□□□ -0.84
RUNX1-213ENST00000469087 SYNJ2BPP57105 145 aa9.79□□□□□ -0.84
RUNX1-213ENST00000469087 PMS2P11Q13670 270 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms