RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 MRPL27Q9P0M9 148 aaKnown RBP2.15□□□□□ -2.07
LSM5-209ENST00000468872 ANAPC10Q9UM13 185 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 CHD5Q8TDI0 1954 aa2.15□□□□□ -2.07
LSM5-209ENST00000468872 ZNF106Q9H2Y7 1883 aaKnown RBP2.14□□□□□ -2.07
LSM5-209ENST00000468872 FAM159BA6NKW6 160 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 PSMD12O00232 456 aaPredicted RBP2.14□□□□□ -2.07
LSM5-209ENST00000468872 APOMO95445 188 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 TTRP02766 147 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 FGF6P10767 208 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 HIST1H1TP22492 207 aaPredicted RBP2.14□□□□□ -2.07
LSM5-209ENST00000468872 NPPCP23582 126 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 ATP6V0CP27449 155 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 CA7P43166 264 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 KRR1Q13601 381 aaKnown RBP2.14□□□□□ -2.07
LSM5-209ENST00000468872 LPCAT3Q6P1A2 487 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 UMODL1-AS1Q8N2C9 162 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 SFRP2Q96HF1 295 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 SIGMAR1Q99720 223 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 NIPSNAP1Q9BPW8 284 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 ARMC1Q9NVT9 282 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 GID8Q9NWU2 228 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 SNX12Q9UMY4 172 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 PXMP4Q9Y6I8 212 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 ABCA1O95477 2261 aa2.14□□□□□ -2.07
LSM5-209ENST00000468872 MYH7BA7E2Y1 1941 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 MYH13Q9UKX3 1938 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 FAM236DA0A1B0GTK5 79 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 DISC1C4P0D8 188 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 FAAHO00519 579 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 NOS1APO75052 506 aaPredicted RBP2.13□□□□□ -2.07
LSM5-209ENST00000468872 MT-CO2P00403 227 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 FAM236CP0DP71 79 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 CCL3P10147 92 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 CD79AP11912 226 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 CRYBB3P26998 211 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 MAGEA12P43365 314 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 SPA17Q15506 151 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 SLC35F6Q8N357 371 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 TSTD1Q8NFU3 115 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 OR2T27Q8NH04 317 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 FNDC9Q8TBE3 224 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 KLK6Q92876 244 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 CEP19Q96LK0 163 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 OR52E6Q96RD3 313 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 DOCK6Q96HP0 2047 aa2.13□□□□□ -2.07
LSM5-209ENST00000468872 SRRM2Q9UQ35 2752 aaKnown RBP2.13□□□□□ -2.07
LSM5-209ENST00000468872 PKHD1P08F94 4074 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 TLCD2A6NGC4 264 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 OR4C46A6NHA9 309 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 H0YJX3 145 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 PIN1P1O15428 100 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 GSTZ1O43708 216 aaPredicted RBP2.12□□□□□ -2.07
LSM5-209ENST00000468872 OR2B3O76000 313 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 CRHBPP24387 322 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 CD200P41217 278 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 TAS2R45P59539 299 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 KRTAP12-4P60329 112 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 HIST1H3AP68431 136 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 BTN3A2P78410 334 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 H3F3AP84243 136 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 CDK10Q15131 360 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 BATFQ16520 125 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 PLPPR5Q32ZL2 321 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 LIN52Q52LA3 116 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 HIST2H3AQ71DI3 136 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 ZNF767PQ75MW2 155 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 SLC36A1Q7Z2H8 476 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 RNASE6Q93091 150 aaKnown RBP2.12□□□□□ -2.07
LSM5-209ENST00000468872 MND1Q9BWT6 205 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 RNASE7Q9H1E1 156 aaKnown RBP2.12□□□□□ -2.07
LSM5-209ENST00000468872 MRPL40Q9NQ50 206 aaKnown RBP2.12□□□□□ -2.07
LSM5-209ENST00000468872 TXNL4BQ9NX01 149 aaKnown RBP2.12□□□□□ -2.07
LSM5-209ENST00000468872 SMPXQ9UHP9 88 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 PSORS1C2Q9UIG4 136 aa2.12□□□□□ -2.07
LSM5-209ENST00000468872 TRGV4A0A0C4DH28 118 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 OR4C45A6NMZ5 311 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 LST1O00453 97 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 SLC17A3O00476 420 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 OR7C1O76099 320 aaPredicted RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 CD52P31358 61 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 RPL5P46777 297 aaKnown RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 SERPINB10P48595 397 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 CRYBA4P53673 196 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 RAB14P61106 215 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 PSME3P61289 254 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 RPL19P84098 196 aaKnown RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 IAH1Q2TAA2 248 aaPredicted RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 AKAP14Q86UN6 197 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 BAP18Q8IXM2 172 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 OR2D3Q8NGH3 330 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 OR52L1Q8NGH7 329 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 MS4A6EQ96DS6 147 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 GNPNAT1Q96EK6 184 aaPredicted RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 DCUN1D1Q96GG9 259 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 CCL13Q99616 98 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 NKX6-2Q9C056 277 aaPredicted RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 DOK5Q9P104 306 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 TAAR3PQ9P1P4 343 aa2.11□□□□□ -2.07
LSM5-209ENST00000468872 FLG2Q5D862 2391 aaPredicted RBP2.11□□□□□ -2.07
LSM5-209ENST00000468872 KIF20BQ96Q89 1820 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 73 ms