RNA–Protein interactions for RNA: ENST00000468253.1

NPHP4-206, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 781 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-206ENST00000468253 K7EQG2 157 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 TFPI2P48307 235 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 RAB31Q13636 194 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 PXDC1Q5TGL8 231 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 S100A7AQ86SG5 101 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 STPG3Q8N7X2 389 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 RNF126Q9BV68 326 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 WFDC10AQ9H1F0 79 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 ZMAT4Q9H898 229 aa14.88□□□□□ -0.03
NPHP4-206ENST00000468253 IGSF23A1L1A6 192 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 MPC2O95563 127 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 PET100P0DJ07 73 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 GATA2P23769 480 aaPredicted RBP14.87□□□□□ -0.03
NPHP4-206ENST00000468253 OXA1LQ15070 435 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 SIGLEC15Q6ZMC9 328 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 WFDC3Q8IUB2 231 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 TMEM217Q8N7C4 229 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 DCANP1Q8TF63 244 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 CHAC2Q8WUX2 184 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 CITED4Q96RK1 184 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 UQCC1Q9NVA1 299 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 U3KQK5 164 aa14.87□□□□□ -0.03
NPHP4-206ENST00000468253 LOC102724200A0A096LPH7 203 aaPredicted RBP14.86□□□□□ -0.03
NPHP4-206ENST00000468253 HYPMO75409 117 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 ORM2P19652 201 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 ZNF546Q86UE3 836 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 STXBP6Q8NFX7 210 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 TMEM147Q9BVK8 224 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 MED28Q9H204 178 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 OR5AC2Q9NZP5 309 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 UBQLN2Q9UHD9 624 aa14.86□□□□□ -0.03
NPHP4-206ENST00000468253 AGPAT2O15120 278 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 BAXQ07812 192 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 LRRC37A5PQ49AS3 106 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 ASB13Q8WXK3 278 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 PPP1R14BQ96C90 147 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 GGTLC1Q9BX51 225 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 MAP6D1Q9H9H5 199 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 NRN1Q9NPD7 142 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 RNF24Q9Y225 148 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 WDR83OSQ9Y284 106 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 NBEAL2Q6ZNJ1 2754 aa14.85□□□□□ -0.03
NPHP4-206ENST00000468253 HUWE1Q7Z6Z7 4374 aaKnown RBP14.84□□□□□ -0.03
NPHP4-206ENST00000468253 KIR2DL5BA0A0G2JN68 375 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 KIR2DL5BA0A0G2JPC4 375 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 ZNF98A6NK75 572 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 OR8I2Q8N0Y5 310 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 KIR2DL5AQ8N109 375 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 OR1B1Q8NGR6 318 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 KIR2DL5BQ8NHK3 375 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 GPR82Q96P67 336 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 SPATA25Q9BR10 227 aa14.84□□□□□ -0.03
NPHP4-206ENST00000468253 UBE2CO00762 179 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 MPDU1O75352 247 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 LINC00869P0C866 280 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 CXCL3P19876 107 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 CAMLGP49069 296 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 RAP2BP61225 183 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 EWSR1Q01844 656 aaKnown RBP eCLIP14.83□□□□□ -0.04
NPHP4-206ENST00000468253 NHLH2Q02577 135 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 SAMD13Q5VXD3 122 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 MGST2Q99735 147 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 HIGD1AQ9Y241 93 aa14.83□□□□□ -0.04
NPHP4-206ENST00000468253 STAB2Q8WWQ8 2551 aa14.82□□□□□ -0.04
NPHP4-206ENST00000468253 ELOA3CA0A087WX78 387 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-206ENST00000468253 LYL1P12980 280 aa14.82□□□□□ -0.04
NPHP4-206ENST00000468253 DEFB131AP59861 70 aa14.82□□□□□ -0.04
NPHP4-206ENST00000468253 APRG1Q8IVJ8 170 aa14.82□□□□□ -0.04
NPHP4-206ENST00000468253 SHANK2-AS3Q9BTD1 123 aa14.82□□□□□ -0.04
NPHP4-206ENST00000468253 SLC25A39Q9BZJ4 359 aaPredicted RBP14.82□□□□□ -0.04
NPHP4-206ENST00000468253 GALR1P47211 349 aa14.81□□□□□ -0.04
NPHP4-206ENST00000468253 RPL29P47914 159 aaKnown RBP14.81□□□□□ -0.04
NPHP4-206ENST00000468253 APOC4P55056 127 aa14.81□□□□□ -0.04
NPHP4-206ENST00000468253 SNRPD3P62318 126 aaKnown RBP14.81□□□□□ -0.04
NPHP4-206ENST00000468253 FCN2Q15485 313 aa14.81□□□□□ -0.04
NPHP4-206ENST00000468253 FAM24BQ8N5W8 94 aa14.81□□□□□ -0.04
NPHP4-206ENST00000468253 ARL6Q9H0F7 186 aa14.81□□□□□ -0.04
NPHP4-206ENST00000468253 PRR20EP86478 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 PRR20CP86479 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 PRR20DP86480 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 PRR20BP86481 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 PRR20AP86496 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 PATE2Q6UY27 113 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 Q6ZRG5 221 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 OR11H7Q8NGC8 314 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 OR5C1Q8NGR4 320 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 RCHY1Q96PM5 261 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 DNAJC4Q9NNZ3 241 aa14.8□□□□□ -0.04
NPHP4-206ENST00000468253 H3BRN7 92 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 OR5G3P0C626 314 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 ID1P41134 155 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 MEOX2P50222 304 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 FGL1Q08830 312 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 Q6ZWC4 215 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 THAP6Q8TBB0 222 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 ARV1Q9H2C2 271 aa14.79□□□□□ -0.04
NPHP4-206ENST00000468253 ZNF688P0C7X2 276 aa14.78□□□□□ -0.04
NPHP4-206ENST00000468253 RPL7P18124 248 aaKnown RBP14.78□□□□□ -0.04
NPHP4-206ENST00000468253 RPL12P30050 165 aaKnown RBP14.78□□□□□ -0.04
NPHP4-206ENST00000468253 WWC2-AS2Q96NR7 200 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 131.4 ms