RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 H2BFSP57053 126 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 POLR2GP62487 172 aaKnown RBP eCLIP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 VAMP2P63027 116 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 RPP30P78346 268 aaKnown RBP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 GAMTQ14353 236 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 LRRC37A5PQ49AS3 106 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 MORN3Q6PF18 240 aaPredicted RBP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 OR11H7Q8NGC8 314 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 C11orf68Q9H3H3 251 aaKnown RBP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 SEPSECSQ9HD40 501 aaKnown RBP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 PAIP2BQ9ULR5 123 aaKnown RBP13.98□□□□□ -0.17
COL7A1-207ENST00000467985 ALMS1Q8TCU4 4167 aa13.98□□□□□ -0.17
COL7A1-207ENST00000467985 ZFP92A6NM28 416 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 BUB3O43684 328 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 MBPP02686 304 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 SPP1P10451 314 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 CXCL3P19876 107 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 SNRPD3P62318 126 aaKnown RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 ID3Q02535 119 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 OR8G2PQ6IF36 304 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 CEMP1Q6PRD7 247 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 TRPT1Q86TN4 253 aaKnown RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 RNF125Q96EQ8 232 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 NRN1Q9NPD7 142 aa13.97□□□□□ -0.17
COL7A1-207ENST00000467985 RCL1Q9Y2P8 373 aaKnown RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 KLK5Q9Y337 293 aaPredicted RBP13.97□□□□□ -0.17
COL7A1-207ENST00000467985 RLN2P04090 185 aa13.96□□□□□ -0.17
COL7A1-207ENST00000467985 PET100P0DJ07 73 aa13.96□□□□□ -0.17
COL7A1-207ENST00000467985 RAB32Q13637 225 aa13.96□□□□□ -0.17
COL7A1-207ENST00000467985 SIGLEC15Q6ZMC9 328 aa13.96□□□□□ -0.17
COL7A1-207ENST00000467985 K7EPK0 472 aa13.95□□□□□ -0.18
COL7A1-207ENST00000467985 ASB13Q8WXK3 278 aa13.95□□□□□ -0.18
COL7A1-207ENST00000467985 RAB40CQ96S21 281 aa13.95□□□□□ -0.18
COL7A1-207ENST00000467985 MFFQ9GZY8 342 aa13.95□□□□□ -0.18
COL7A1-207ENST00000467985 GIPP09681 153 aaPredicted RBP13.94□□□□□ -0.18
COL7A1-207ENST00000467985 PSMG4Q5JS54 123 aa13.94□□□□□ -0.18
COL7A1-207ENST00000467985 ACTL10Q5JWF8 245 aa13.94□□□□□ -0.18
COL7A1-207ENST00000467985 PPP1R1CQ8WVI7 109 aa13.94□□□□□ -0.18
COL7A1-207ENST00000467985 PBDC1Q9BVG4 233 aa13.94□□□□□ -0.18
COL7A1-207ENST00000467985 PSENENQ9NZ42 101 aa13.94□□□□□ -0.18
COL7A1-207ENST00000467985 HYDINQ4G0P3 5121 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 IGKV1D-37A0A075B6S9 117 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 KNCNA6PVL3 124 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 H3BP45 60 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 BCAP31P51572 246 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 RAP2BP61225 183 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 ZNF90Q03938 601 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 SPANXN5Q5MJ07 72 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 C1orf194Q5T5A4 169 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 C11orf45Q8TAV5 145 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 LINC00476Q8WZB0 136 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 TRGV9Q99603 122 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 FBXL17Q9UF56 701 aa13.93□□□□□ -0.18
COL7A1-207ENST00000467985 STRAPQ9Y3F4 350 aaKnown RBP13.93□□□□□ -0.18
COL7A1-207ENST00000467985 CFDP00746 253 aaPredicted RBP13.92□□□□□ -0.18
COL7A1-207ENST00000467985 PHLDA1Q8WV24 401 aaPredicted RBP13.92□□□□□ -0.18
COL7A1-207ENST00000467985 AGRNO00468 2067 aa13.92□□□□□ -0.18
COL7A1-207ENST00000467985 DEDDO75618 318 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 GIG44P09565 113 aaPredicted RBP13.91□□□□□ -0.18
COL7A1-207ENST00000467985 CAV2P51636 162 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 NUTF2P61970 127 aaKnown RBP13.91□□□□□ -0.18
COL7A1-207ENST00000467985 FGL1Q08830 312 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 IL15RAQ13261 267 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 THAP8Q8NA92 274 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 THAP6Q8TBB0 222 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 SMIM8Q96KF7 97 aa13.91□□□□□ -0.18
COL7A1-207ENST00000467985 A0A1B0GVG6 124 aa13.9□□□□□ -0.18
COL7A1-207ENST00000467985 MPC2O95563 127 aa13.9□□□□□ -0.18
COL7A1-207ENST00000467985 TAS2R30P59541 319 aa13.9□□□□□ -0.18
COL7A1-207ENST00000467985 LYZP61626 148 aa13.9□□□□□ -0.18
COL7A1-207ENST00000467985 C1QTNF4Q9BXJ3 329 aa13.9□□□□□ -0.18
COL7A1-207ENST00000467985 E5RGE8 158 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 TSC22D2O75157 780 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 MIFP14174 115 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 ID1P41134 155 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 OR2T35Q8NGX2 323 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 PPP1R14BQ96C90 147 aa13.89□□□□□ -0.19
COL7A1-207ENST00000467985 PRSS46E5RG02 174 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 CCNKO75909 580 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 LY6G6CO95867 125 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 C4BPBP20851 252 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 S100A7P31151 101 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 NANOS2P60321 138 aaKnown RBP13.88□□□□□ -0.19
COL7A1-207ENST00000467985 OR2F1Q13607 317 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 SAMD13Q5VXD3 122 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 AKAP14Q86UN6 197 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 Q8NAQ8 132 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 OR5AC2Q9NZP5 309 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 MBD2Q9UBB5 411 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 SLC45A2Q9UMX9 530 aa13.88□□□□□ -0.19
COL7A1-207ENST00000467985 EPPK1P58107 5090 aaKnown RBP13.88□□□□□ -0.19
COL7A1-207ENST00000467985 IGKV1OR2-108A0A075B7D4 117 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 ZNF705EA8MWA4 302 aaPredicted RBP13.87□□□□□ -0.19
COL7A1-207ENST00000467985 HLA-DRB4P13762 266 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 STX12Q86Y82 276 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 OR8I2Q8N0Y5 310 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 CHAC2Q8WUX2 184 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 HRH4Q9H3N8 390 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 HLA-DRB4X5D2U9 266 aa13.87□□□□□ -0.19
COL7A1-207ENST00000467985 H3BMM0 161 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms