RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 ZNF833PQ6ZTB9 187 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 BORCS7Q96B45 105 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 RNASE7Q9H1E1 156 aaKnown RBP-0.04□□□□□ -2.42
SMC4-207ENST00000467263 PCTPQ9UKL6 214 aa-0.04□□□□□ -2.42
SMC4-207ENST00000467263 TRAV10A0A0B4J240 114 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 F8W1H4 67 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 Q6Q795 121 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 OR6V1Q8N148 313 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 FAM103A1Q9BTL3 118 aaKnown RBP-0.05□□□□□ -2.42
SMC4-207ENST00000467263 TMEM133Q9H2Q1 129 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 UQCC1Q9NVA1 299 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 MED29Q9NX70 200 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 NOSIPQ9Y314 301 aaKnown RBP-0.05□□□□□ -2.42
SMC4-207ENST00000467263 CECR2Q9BXF3 1484 aa-0.05□□□□□ -2.42
SMC4-207ENST00000467263 PTPRFP10586 1907 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 A0A087WUJ7 227 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 H3BRM9 83 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 C8GP07360 202 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 SRP14P37108 136 aaKnown RBP-0.06□□□□□ -2.42
SMC4-207ENST00000467263 IAH1Q2TAA2 248 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-207ENST00000467263 C4orf22Q6V702 233 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 TEN1Q86WV5 123 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 OR5D14Q8NGL3 314 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 STAG3L4Q8TBR4 150 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 TMEM138Q9NPI0 162 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 TVP23BQ9NYZ1 205 aa-0.06□□□□□ -2.42
SMC4-207ENST00000467263 KDM6AO15550 1401 aaPredicted RBP-0.06□□□□□ -2.42
SMC4-207ENST00000467263 NUPR2A6NF83 97 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 J3QRK9 145 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 ZNF137PP52743 207 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 ROMO1P60602 79 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 C6orf52Q5T4I8 152 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 PDZD9Q8IXQ8 264 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 WFDC10AQ9H1F0 79 aa-0.07□□□□□ -2.42
SMC4-207ENST00000467263 ZGRF1Q86YA3 2104 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 SPINT3P49223 89 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 IMPG1Q17R60 797 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 OR10K1Q8NGX5 313 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 CCDC42Q96M95 316 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 LINC00467Q9BRT7 94 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 SPRR2GQ9BYE4 73 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 PARD6GQ9BYG4 376 aaPredicted RBP-0.08□□□□□ -2.42
SMC4-207ENST00000467263 RNF122Q9H9V4 155 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 GPR98Q8WXG9 6306 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 ARHGEF11O15085 1522 aa-0.08□□□□□ -2.42
SMC4-207ENST00000467263 B4DSR2 109 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 LYPLA2O95372 231 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 OMPP47874 163 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 FOXA3P55318 350 aaPredicted RBP-0.09□□□□□ -2.42
SMC4-207ENST00000467263 KRR1Q13601 381 aaKnown RBP-0.09□□□□□ -2.42
SMC4-207ENST00000467263 LYRM7Q5U5X0 104 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 GLIPR1L1Q6UWM5 242 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 Q6ZS92 163 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 TRAPPC5Q8IUR0 188 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 OR10AC1Q8NH08 325 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 Q8TAT8 98 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 CANT1Q8WVQ1 401 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 TMEM126AQ9H061 195 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 PRELID3BQ9Y3B1 194 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 LY96Q9Y6Y9 160 aa-0.09□□□□□ -2.42
SMC4-207ENST00000467263 SPTBP11277 2137 aa-0.1□□□□□ -2.42
SMC4-207ENST00000467263 TRGV10A0A0A0MS01 117 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 A8MWV9 139 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 KPNA3O00505 521 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-207ENST00000467263 NDUFB3O43676 98 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 PDE6DO43924 150 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 ERC2-IT1O76042 136 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 DSCR4P56555 118 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-207ENST00000467263 ZC2HC1AQ96GY0 325 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 SLC25A21Q9BQT8 299 aaPredicted RBP-0.1□□□□□ -2.43
SMC4-207ENST00000467263 GLTPQ9NZD2 209 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 COL7A1Q02388 2944 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 FREM3P0C091 2139 aa-0.1□□□□□ -2.43
SMC4-207ENST00000467263 PIK3C2GO75747 1445 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 E7EUB6 86 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 C5orf67F2Z3F1 127 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 COX7CP15954 63 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 ATOH7Q8N100 152 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 OR51A2Q8NGJ7 313 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 LYSMD1Q96S90 227 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 TRIM4Q9C037 500 aa-0.11□□□□□ -2.43
SMC4-207ENST00000467263 TRAV23DV6A0A075B6W5 121 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 SMIM23A6NLE4 172 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 PPYP01298 95 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 RPS17P08708 135 aaKnown RBP-0.12□□□□□ -2.43
SMC4-207ENST00000467263 SPATA45Q537H7 98 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 C22orf39Q6P5X5 142 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 NABP2Q9BQ15 211 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 GGACTQ9BVM4 153 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 CTNNBIP1Q9NSA3 81 aaPredicted RBP-0.12□□□□□ -2.43
SMC4-207ENST00000467263 JPT1Q9UK76 154 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 KNTC1P50748 2209 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 RTL1A6NKG5 1358 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 SYNE2Q8WXH0 6885 aaKnown RBP-0.12□□□□□ -2.43
SMC4-207ENST00000467263 IGSF10Q6WRI0 2623 aa-0.12□□□□□ -2.43
SMC4-207ENST00000467263 KIF1BO60333 1816 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 ZFYVE26Q68DK2 2539 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 FSIP2Q5CZC0 6907 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 TRBV30A0A0K0K1B3 111 aa-0.13□□□□□ -2.43
SMC4-207ENST00000467263 JMJD7-PLA2G4BH0Y9G9 81 aa-0.13□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms