RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 HBG2P69892 147 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 NHLH2Q02577 135 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 HAGHQ16775 308 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 LEMD1Q68G75 181 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 SIGLEC15Q6ZMC9 328 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 OR8I2Q8N0Y5 310 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 FAM24BQ8N5W8 94 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 STPG3Q8N7X2 389 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 GLMPQ8WWB7 406 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 CITED4Q96RK1 184 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 TMEM147Q9BVK8 224 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 GGACTQ9BVM4 153 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 SLC25A31Q9H0C2 315 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 ARL6Q9H0F7 186 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 UQCC1Q9NVA1 299 aa8.96□□□□□ -0.98
SHROOM3-202ENST00000466541 A8MZ25 164 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 AGPAT2O15120 278 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 MPC2O95563 127 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 ZNF688P0C7X2 276 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 NHLRC4P0CG21 123 aaPredicted RBP8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 NUP62P37198 522 aaPredicted RBP8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 DEFB131AP59861 70 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 EWSR1Q01844 656 aaKnown RBP eCLIP8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 BAXQ07812 192 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 RAB31Q13636 194 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 CLINT1Q14677 625 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 ZMAT4Q9H898 229 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 RETNQ9HD89 108 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 MBD2Q9UBB5 411 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 U3KQK5 164 aa8.95□□□□□ -0.98
SHROOM3-202ENST00000466541 TENM3Q9P273 2699 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 LOC102724200A0A096LPH7 203 aaPredicted RBP8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 FNDC10F2Z333 226 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 CFDP00746 253 aaPredicted RBP8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 PET100P0DJ07 73 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 FGF7P21781 194 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 CAMLGP49069 296 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 AP2S1P53680 142 aaPredicted RBP8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 RAP2BP61225 183 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 SELENOTP62341 195 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 ZNF546Q86UE3 836 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 OR11H7Q8NGC8 314 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 OR5C1Q8NGR4 320 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 THAP6Q8TBB0 222 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 UHRF2Q96PU4 802 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 MGST2Q99735 147 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 RNF126Q9BV68 326 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 SCRT1Q9BWW7 348 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 SMIM3Q9BZL3 60 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 MAP6D1Q9H9H5 199 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 HIGD1AQ9Y241 93 aa8.94□□□□□ -0.98
SHROOM3-202ENST00000466541 ZNF98A6NK75 572 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 K7EQG2 157 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 COX7A2P2O60397 106 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 CMC4P56277 68 aaPredicted RBP8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 FGL1Q08830 312 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 OXA1LQ15070 435 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 PSMG4Q5JS54 123 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 MIC13Q5XKP0 118 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 LINC00052Q96N35 136 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 RCHY1Q96PM5 261 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 FAM110AQ9BQ89 295 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 GGTLC1Q9BX51 225 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 SLC25A32Q9H2D1 315 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 NRN1Q9NPD7 142 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 SLC45A2Q9UMX9 530 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 DNAH9Q9NYC9 4486 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 AGRNO00468 2067 aa8.93□□□□□ -0.98
SHROOM3-202ENST00000466541 KNCNA6PVL3 124 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 RPL12P30050 165 aaKnown RBP8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 S100A7P31151 101 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 ATP6V1FQ16864 119 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 C1orf194Q5T5A4 169 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 DCANP1Q8TF63 244 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 RSG1Q9BU20 258 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 SLC25A39Q9BZJ4 359 aaPredicted RBP8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 FBXL17Q9UF56 701 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 WDR83OSQ9Y284 106 aa8.92□□□□□ -0.98
SHROOM3-202ENST00000466541 TRAV2A0A0B4J234 112 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 SNRPCP09234 159 aaKnown RBP8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 ATF4P18848 351 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 GALR1P47211 349 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 SNRPD3P62318 126 aaKnown RBP8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 VWC2Q2TAL6 325 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 ACTL10Q5JWF8 245 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 PATE2Q6UY27 113 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 LINC00322Q6ZN03 302 aaPredicted RBP8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 STHQ8IWL8 128 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 SPATA25Q9BR10 227 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 SHANK2-AS3Q9BTD1 123 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 ARV1Q9H2C2 271 aa8.91□□□□□ -0.98
SHROOM3-202ENST00000466541 H3BRN7 92 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 APOC4P55056 127 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 B2MP61769 119 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 C10orf113Q5VZT2 155 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 Q6ZRG5 221 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 LINC00305Q7Z4B0 112 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 TM2D3Q9BRN9 247 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 HSPB11Q9Y547 144 aa8.9□□□□□ -0.98
SHROOM3-202ENST00000466541 PXMP4Q9Y6I8 212 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms