RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 PYDC2Q56P42 97 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 GSG1LQ6UXU4 331 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 OR8I2Q8N0Y5 310 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 TOMM5Q8N4H5 51 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 OR4B1Q8NGF8 309 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 TRIM63Q969Q1 353 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 NDUFAF3Q9BU61 184 aa13.73□□□□□ -0.21
COL9A3-206ENST00000466532 DNAH17Q9UFH2 4485 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 IGKV1OR2-108A0A075B7D4 117 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 MED6O75586 246 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 SPART-AS1P0CW21 52 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 LRTM2Q8N967 370 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF709Q8N972 641 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 THAP8Q8NA92 274 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 CLUHP3Q96NS8 147 aa13.72□□□□□ -0.21
COL9A3-206ENST00000466532 DNAH2Q9P225 4427 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 TMEM189A5PLL7 270 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 ISLRO14498 428 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 P0DMU3 169 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 FAM231AP0DMU4 169 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 FAM231CP0DMU5 169 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 SLC25A6P12236 298 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 ZNF79Q15937 498 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 SPATA31B1PQ5VZV4 182 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 EBLN2Q6P2I7 272 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 KRTAP17-1Q9BYP8 105 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 SLC35B3Q9H1N7 401 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 RFNGQ9Y644 331 aa13.71□□□□□ -0.21
COL9A3-206ENST00000466532 F6UB75 175 aa13.7□□□□□ -0.22
COL9A3-206ENST00000466532 PAX9P55771 341 aa13.7□□□□□ -0.22
COL9A3-206ENST00000466532 RPP30P78346 268 aaKnown RBP13.7□□□□□ -0.22
COL9A3-206ENST00000466532 POM121L12Q8N7R1 296 aa13.7□□□□□ -0.22
COL9A3-206ENST00000466532 CIB3Q96Q77 187 aaPredicted RBP13.7□□□□□ -0.22
COL9A3-206ENST00000466532 SLC25A21Q9BQT8 299 aaPredicted RBP13.7□□□□□ -0.22
COL9A3-206ENST00000466532 MAGT1Q9H0U3 335 aa13.7□□□□□ -0.22
COL9A3-206ENST00000466532 TMED3Q9Y3Q3 217 aa13.7□□□□□ -0.22
COL9A3-206ENST00000466532 WRBO00258 174 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 SYNGR2O43760 224 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 SFT2D2O95562 160 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 CFDP00746 253 aaPredicted RBP13.69□□□□□ -0.22
COL9A3-206ENST00000466532 MEOX2P50222 304 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 PSG9Q00887 426 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 PPP1R1AQ13522 171 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 FAM78BQ5VT40 261 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 GGNBP1Q5YKI7 109 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 LINC00336Q6ZUF6 198 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 C16orf92Q96LL3 132 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 SLC25A32Q9H2D1 315 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 SLC25A22Q9H936 323 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 RPRMQ9NS64 109 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 GOLT1BQ9Y3E0 138 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 V9GYH0 126 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 FAT2Q9NYQ8 4349 aa13.69□□□□□ -0.22
COL9A3-206ENST00000466532 A0A0J9YX75 114 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 PRSS46E5RG02 174 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 HOXB5P09067 269 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 GALR1P47211 349 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 C7orf50Q9BRJ6 194 aaKnown RBP13.68□□□□□ -0.22
COL9A3-206ENST00000466532 DKK2Q9UBU2 259 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 KIAA1109Q2LD37 5005 aa13.68□□□□□ -0.22
COL9A3-206ENST00000466532 TEX48A0A1B0GUV7 120 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 SPANXN5Q5MJ07 72 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 FAM222AQ5U5X8 452 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 BPIFCQ8NFQ6 507 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 C20orf173Q96LM9 149 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 NIPSNAP3BQ9BS92 247 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 SLC45A2Q9UMX9 530 aa13.67□□□□□ -0.22
COL9A3-206ENST00000466532 ZNF98A6NK75 572 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 H3BP45 60 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 HBE1P02100 147 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 ORM2P19652 201 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 GATA2P23769 480 aaPredicted RBP13.66□□□□□ -0.22
COL9A3-206ENST00000466532 S100A5P33763 92 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 AKR1C1Q04828 323 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 C1orf158Q8N1D5 194 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 DEDD2Q8WXF8 326 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 RSG1Q9BU20 258 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 DOK5Q9P104 306 aa13.66□□□□□ -0.22
COL9A3-206ENST00000466532 NACAE9PAV3 2078 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 LOC102723971A0A1B0GUV8 181 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 M0R2N4 97 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 TMEM182Q6ZP80 229 aaPredicted RBP13.65□□□□□ -0.22
COL9A3-206ENST00000466532 OR1B1Q8NGR6 318 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 C17orf77Q96MU5 243 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 TMEM147Q9BVK8 224 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 PLA2G2EQ9NZK7 142 aa13.65□□□□□ -0.22
COL9A3-206ENST00000466532 STRAPQ9Y3F4 350 aaKnown RBP13.65□□□□□ -0.22
COL9A3-206ENST00000466532 S100A7P31151 101 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 ACOT7LQ6ZUV0 252 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 OR4D5Q8NGN0 318 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 FAM210BQ96KR6 192 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 GPR82Q96P67 336 aa13.64□□□□□ -0.23
COL9A3-206ENST00000466532 YTHDF2Q9Y5A9 579 aaKnown RBP13.64□□□□□ -0.23
COL9A3-206ENST00000466532 CCDC160A6NGH7 325 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 A8MTW9 85 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 IFNA21P01568 189 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 HTN3P15516 51 aa13.63□□□□□ -0.23
COL9A3-206ENST00000466532 RRN3P1Q2M238 152 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms