RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 H3BP45 60 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 IGLV1-51P01701 117 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 TRBV12-3P01733 135 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 METTL15P1P0C7V9 234 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 C8orf88P0DMB2 117 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 CBLN1P23435 193 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 MEOX2P50222 304 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 PAX9P55771 341 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 ZNF266Q14584 549 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 LRRC37A5PQ49AS3 106 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 C1orf194Q5T5A4 169 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 RBPMS2Q6ZRY4 209 aaKnown RBP5.26□□□□□ -1.57
CLDN4-204ENST00000466411 STPG3Q8N7X2 389 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 CLRN3Q8NCR9 226 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 TMEM170AQ8WVE7 144 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 NPIPB3Q92617 1050 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 PFDN5Q99471 154 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 CHRDL1Q9BU40 450 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 TMEM147Q9BVK8 224 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 ZMAT4Q9H898 229 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 ZC4H2Q9NQZ6 224 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 RABAC1Q9UI14 185 aa5.26□□□□□ -1.57
CLDN4-204ENST00000466411 ZNF256Q9Y2P7 627 aaPredicted RBP5.26□□□□□ -1.57
CLDN4-204ENST00000466411 PUS1Q9Y606 427 aaKnown RBP eCLIP5.26□□□□□ -1.57
CLDN4-204ENST00000466411 TRAV2A0A0B4J234 112 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IGHV7-4-1A0A0J9YVY3 117 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 TMEM213A2RRL7 107 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 OR4C46A6NHA9 309 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IFNA5P01569 189 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IGKV1-17P01599 117 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IGHV3-23P01764 117 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IL4P05112 153 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 HNRNPCP07910 306 aaKnown RBP eCLIP5.25□□□□□ -1.57
CLDN4-204ENST00000466411 FOLR2P14207 255 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 CRYBB3P26998 211 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 RPL12P30050 165 aaKnown RBP5.25□□□□□ -1.57
CLDN4-204ENST00000466411 DEFA5Q01523 94 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 VWC2Q2TAL6 325 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 Q6ZRG5 221 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 TMEM252Q8N6L7 170 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 ZNF709Q8N972 641 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 OR2T35Q8NGX2 323 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 RNF125Q96EQ8 232 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 DUX3Q96PT4 197 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 SPAG8Q99932 426 aaPredicted RBP5.25□□□□□ -1.57
CLDN4-204ENST00000466411 FAM110AQ9BQ89 295 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 C20orf24Q9BUV8 137 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 PARD6GQ9BYG4 376 aaPredicted RBP5.25□□□□□ -1.57
CLDN4-204ENST00000466411 C11orf1Q9H5F2 150 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.25□□□□□ -1.57
CLDN4-204ENST00000466411 S4R3C0 116 aa5.25□□□□□ -1.57
CLDN4-204ENST00000466411 IGHV3-21A0A0B4J1V1 117 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 PMS2P5A8MQ11 134 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 TAAR5O14804 337 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 CST7O76096 145 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 SIX6O95475 246 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 CSN3P07498 182 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 PSG1P11464 419 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 CXCL3P19876 107 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 C4BPBP20851 252 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 CAMLGP49069 296 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 PLP1P60201 277 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 EWSR1Q01844 656 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLDN4-204ENST00000466411 ZNF345Q14585 488 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 FCN2Q15485 313 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 TOMM20LQ6UXN7 152 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 OR11H7Q8NGC8 314 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 OR5C1Q8NGR4 320 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 OR1L4Q8NGR5 311 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 AQP10Q96PS8 301 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 RNF2Q99496 336 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 ATP5SQ99766 215 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 ASCL2Q99929 193 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 SEPSECSQ9HD40 501 aaKnown RBP5.24□□□□□ -1.57
CLDN4-204ENST00000466411 MBD2Q9UBB5 411 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 SMPXQ9UHP9 88 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 HSPB11Q9Y547 144 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 PKHD1P08F94 4074 aa5.24□□□□□ -1.57
CLDN4-204ENST00000466411 BORCS7-ASMTA0A0B4J1R7 106 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 HMSDA8MTL9 139 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 TSPAN4O14817 238 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 AGPAT2O15120 278 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 CCNKO75909 580 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 IGHV3-48P01763 117 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 GALR1P47211 349 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 RPL29P47914 159 aaKnown RBP5.23□□□□□ -1.57
CLDN4-204ENST00000466411 EIF5AP63241 154 aaKnown RBP5.23□□□□□ -1.57
CLDN4-204ENST00000466411 SRSF3P84103 164 aaKnown RBP5.23□□□□□ -1.57
CLDN4-204ENST00000466411 TIGITQ495A1 244 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 UNQ9165/PRO28630Q6UXU0 137 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 CYP2G1PQ6ZSU1 146 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 TMEM217Q8N7C4 229 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 STXBP6Q8NFX7 210 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 SCGB1C1Q8TD33 95 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 PPP1R14BQ96C90 147 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 C16orf92Q96LL3 132 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 RCHY1Q96PM5 261 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 RHPN1-AS1Q9BWJ2 59 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 VSIRQ9H7M9 311 aa5.23□□□□□ -1.57
CLDN4-204ENST00000466411 CLEC5AQ9NY25 188 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms