RNA–Protein interactions for RNA: ENST00000466288.1

CXCR4-203, Transcript of C-X-C motif chemokine receptor 4, humanhuman

TSL 1 (best)

Gene CXCR4, Length 1,485 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-203ENST00000466288 TNFSF12O43508 249 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 DFFBO76075 338 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 ATG12O94817 140 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 FGF2P09038 288 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 TPT1P13693 172 aaKnown RBP10.4□□□□□ -0.74
CXCR4-203ENST00000466288 PAFAH1B2P68402 229 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 RAB32Q13637 225 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 FAM24BQ8N5W8 94 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 ST8SIA2Q92186 375 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 LSM10Q969L4 123 aaKnown RBP10.4□□□□□ -0.74
CXCR4-203ENST00000466288 TP53RKQ96S44 253 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 CCL28Q9NRJ3 127 aa10.4□□□□□ -0.74
CXCR4-203ENST00000466288 F11RQ9Y624 299 aaKnown RBP10.4□□□□□ -0.74
CXCR4-203ENST00000466288 H0YIZ8 118 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 RBFOX2O43251 390 aaKnown RBP eCLIP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 CFDP00746 253 aaPredicted RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 PVALBP20472 110 aaPredicted RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 RELQ04864 619 aaPredicted RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 SP6Q3SY56 376 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 Q56UQ5 140 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 TMEM268Q5VZI3 342 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 THOC7Q6I9Y2 204 aaKnown RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 Q6ZRM9 215 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 TCF24Q7RTU0 167 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 LYZL2Q7Z4W2 148 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 TRPT1Q86TN4 253 aaKnown RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 STHQ8IWL8 128 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 SELENOHQ8IZQ5 122 aaKnown RBP10.39□□□□□ -0.75
CXCR4-203ENST00000466288 MS4A6AQ9H2W1 248 aa10.39□□□□□ -0.75
CXCR4-203ENST00000466288 TEX50A0A1B0GTY4 177 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 A0A1B0GU03 582 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 NUPL2O15504 423 aaKnown RBP10.38□□□□□ -0.75
CXCR4-203ENST00000466288 YIF1AO95070 293 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 NQO2P16083 231 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 P2RY1P47900 373 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 TMEM41BQ5BJD5 291 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 HSD17B13Q7Z5P4 300 aaPredicted RBP10.38□□□□□ -0.75
CXCR4-203ENST00000466288 LILRB2Q8N423 598 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 SLC35G3Q8N808 338 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 OR4D5Q8NGN0 318 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 OR1S1Q8NH92 325 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 ZNF471Q9BX82 626 aaPredicted RBP10.38□□□□□ -0.75
CXCR4-203ENST00000466288 TMEM140Q9NV12 185 aa10.38□□□□□ -0.75
CXCR4-203ENST00000466288 K7EPK0 472 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 HPRT1P00492 218 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 IFNA10P01566 189 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 S100A10P60903 97 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 CATR1Q13166 79 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 NMSQ5H8A3 153 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 SOHLH1Q5JUK2 328 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 FAM219AQ8IW50 185 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 CSNK1G2-AS1Q8NCQ2 148 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 NDUFA4L2Q9NRX3 87 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 OR5AC2Q9NZP5 309 aa10.37□□□□□ -0.75
CXCR4-203ENST00000466288 TRAV2A0A0B4J234 112 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 C16orf90A8MZG2 172 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 DNASE2O00115 360 aaPredicted RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 MBPP02686 304 aaPredicted RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 APOHP02749 345 aaPredicted RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 CD5P06127 495 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 SPP1P10451 314 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 RPL12P30050 165 aaKnown RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 NKX2-1P43699 371 aaPredicted RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 MORN3Q6PF18 240 aaPredicted RBP10.36□□□□□ -0.75
CXCR4-203ENST00000466288 BAP18Q8IXM2 172 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 Q8N1X5 172 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 OR1L8Q8NGR8 309 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 VSIRQ9H7M9 311 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 PRR13Q9NZ81 148 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 CACFD1Q9UGQ2 172 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 NMBP08949 121 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 ID3Q02535 119 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 C1orf134Q5TEV5 83 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 DMBX1Q8NFW5 382 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 LHFPL5Q8TAF8 219 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 SLC25A31Q9H0C2 315 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 CLEC5AQ9NY25 188 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 PFDN2Q9UHV9 154 aa10.36□□□□□ -0.75
CXCR4-203ENST00000466288 FAM90A26D6RGX4 464 aa10.35□□□□□ -0.75
CXCR4-203ENST00000466288 IFNA17P01571 189 aa10.35□□□□□ -0.75
CXCR4-203ENST00000466288 ALKAL2Q6UX46 152 aa10.35□□□□□ -0.75
CXCR4-203ENST00000466288 EIF4E3Q8N5X7 224 aaKnown RBP10.35□□□□□ -0.75
CXCR4-203ENST00000466288 RRNAD1Q96FB5 475 aaKnown RBP10.35□□□□□ -0.75
CXCR4-203ENST00000466288 TMEM14BQ9NUH8 114 aa10.35□□□□□ -0.75
CXCR4-203ENST00000466288 FAT1Q14517 4588 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 BORCS7-ASMTA0A0B4J1R7 106 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 IGHV3-66A0A0C4DH42 116 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 I3L2K1 104 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 UBE2DNLQ8IWF7 75 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 RNF141Q8WVD5 230 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 RAB40CQ96S21 281 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 HINT2Q9BX68 163 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 CYTL1Q9NRR1 136 aa10.34□□□□□ -0.75
CXCR4-203ENST00000466288 LSM5Q9Y4Y9 91 aaKnown RBP10.34□□□□□ -0.75
CXCR4-203ENST00000466288 KNCNA6PVL3 124 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 PITX3O75364 302 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 MFAP4P55083 255 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 TAS2R30P59541 319 aa10.33□□□□□ -0.76
CXCR4-203ENST00000466288 RPL11P62913 178 aaKnown RBP10.33□□□□□ -0.76
CXCR4-203ENST00000466288 TNP2Q05952 138 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms