RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 STAB1Q9NY15 2570 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 ACOT6Q3I5F7 207 aaPredicted RBP13.18□□□□□ -0.3
PTPRU-206ENST00000465525 TMEM41BQ5BJD5 291 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 SPATA31B1PQ5VZV4 182 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 FAM213BQ8TBF2 198 aa13.18□□□□□ -0.3
PTPRU-206ENST00000465525 IGHV3-49A0A0A0MS15 119 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 CCL24O00175 119 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 NDUFA4O00483 81 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 HMGB3O15347 200 aaKnown RBP13.17□□□□□ -0.3
PTPRU-206ENST00000465525 HYPMO75409 117 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 M6PRP20645 277 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 EDN2P20800 178 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 MORN5Q5VZ52 161 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 C10orf113Q5VZT2 155 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 SLC25A22Q9H936 323 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 WNK1Q9H4A3 2382 aa13.17□□□□□ -0.3
PTPRU-206ENST00000465525 IGHV3OR16-13A0A075B7E8 117 aa13.16□□□□□ -0.3
PTPRU-206ENST00000465525 IGHV3-74A0A0B4J1X5 117 aa13.16□□□□□ -0.3
PTPRU-206ENST00000465525 SSX7Q7RTT5 188 aa13.16□□□□□ -0.3
PTPRU-206ENST00000465525 RPP25LQ8N5L8 163 aaKnown RBP13.16□□□□□ -0.3
PTPRU-206ENST00000465525 SEPSECSQ9HD40 501 aaKnown RBP13.16□□□□□ -0.3
PTPRU-206ENST00000465525 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
PTPRU-206ENST00000465525 ZP3P21754 424 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 SULT1A2P50226 295 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 PLP1P60201 277 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 ZNF726P1Q15940 193 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 FAM106AQ4KMX7 169 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 TM4SF20Q53R12 229 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 FAM78BQ5VT40 261 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 LEMD1Q68G75 181 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 GPHB5Q86YW7 130 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 TMEM190Q8WZ59 177 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 HIGD1AQ9Y241 93 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 SELENOKQ9Y6D0 94 aa13.15□□□□□ -0.3
PTPRU-206ENST00000465525 TRAV5A0A0B4J249 113 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 IGHV3-66A0A0C4DH42 116 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 APOHP02749 345 aaPredicted RBP13.15□□□□□ -0.31
PTPRU-206ENST00000465525 LINC00305Q7Z4B0 112 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 OR1L4Q8NGR5 311 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 DLX4Q92988 240 aaPredicted RBP13.15□□□□□ -0.31
PTPRU-206ENST00000465525 SCRT1Q9BWW7 348 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 MRPL27Q9P0M9 148 aaKnown RBP13.15□□□□□ -0.31
PTPRU-206ENST00000465525 RABAC1Q9UI14 185 aa13.15□□□□□ -0.31
PTPRU-206ENST00000465525 A0A1B0GV50 99 aa13.14□□□□□ -0.31
PTPRU-206ENST00000465525 ZNF705EA8MWA4 302 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-206ENST00000465525 UMAD1C9J7I0 102 aa13.14□□□□□ -0.31
PTPRU-206ENST00000465525 MBP02144 154 aa13.14□□□□□ -0.31
PTPRU-206ENST00000465525 KLF5Q13887 457 aaPredicted RBP13.14□□□□□ -0.31
PTPRU-206ENST00000465525 PFDN5Q99471 154 aa13.14□□□□□ -0.31
PTPRU-206ENST00000465525 CDC34P49427 236 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-206ENST00000465525 FHL3Q13643 280 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 PXDC1Q5TGL8 231 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 OR4F17Q8NGA8 305 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 GATAD1Q8WUU5 269 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 OR4F4Q96R69 305 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 CITED4Q96RK1 184 aa13.13□□□□□ -0.31
PTPRU-206ENST00000465525 SLC25A39Q9BZJ4 359 aaPredicted RBP13.13□□□□□ -0.31
PTPRU-206ENST00000465525 ELOA3CA0A087WX78 387 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-206ENST00000465525 A0A1W2PPV4 95 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 MYCNOSP40205 109 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 RHOBP62745 196 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 LCN15Q6UWW0 184 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 SPATA3Q8NHX4 192 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 RNF141Q8WVD5 230 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 RAB24Q969Q5 203 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 METTL26Q96S19 204 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-206ENST00000465525 MED9Q9NWA0 146 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 FUT9Q9Y231 359 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 H3BRN7 92 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 NPPCP23582 126 aa13.12□□□□□ -0.31
PTPRU-206ENST00000465525 FGF8P55075 233 aaPredicted RBP13.12□□□□□ -0.31
PTPRU-206ENST00000465525 SEC14L6B5MCN3 397 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 M0QZ24 198 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 SNRPCP09234 159 aaKnown RBP13.11□□□□□ -0.31
PTPRU-206ENST00000465525 RAB5CP51148 216 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 REC114Q7Z4M0 266 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 COMMD7Q86VX2 200 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 SHANK2-AS3Q9BTD1 123 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 DAZ1Q9NQZ3 744 aaKnown RBP13.11□□□□□ -0.31
PTPRU-206ENST00000465525 UFC1Q9Y3C8 167 aa13.11□□□□□ -0.31
PTPRU-206ENST00000465525 TMEM213A2RRL7 107 aa13.1□□□□□ -0.31
PTPRU-206ENST00000465525 LGALS9O00182 355 aa13.1□□□□□ -0.31
PTPRU-206ENST00000465525 CRYBB3P26998 211 aa13.1□□□□□ -0.31
PTPRU-206ENST00000465525 SFT2D1Q8WV19 159 aa13.1□□□□□ -0.31
PTPRU-206ENST00000465525 SLC25A2Q9BXI2 301 aa13.1□□□□□ -0.31
PTPRU-206ENST00000465525 CTXND1A0A1B0GTU2 59 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 ZNF98A6NK75 572 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 PF4P02776 101 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 NMBP08949 121 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 DPPA3Q6W0C5 159 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 LRRC20Q8TCA0 184 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 MRPL32Q9BYC8 188 aaKnown RBP13.09□□□□□ -0.31
PTPRU-206ENST00000465525 PFDN2Q9UHV9 154 aa13.09□□□□□ -0.31
PTPRU-206ENST00000465525 IGHV7-4-1A0A0J9YVY3 117 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 MAP1LC3B2A6NCE7 125 aa13.08□□□□□ -0.31
PTPRU-206ENST00000465525 A8MWP6 167 aa13.08□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms