RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 SLC25A31Q9H0C2 315 aa15.13■□□□□ 0.01
SKA3-205ENST00000465471 IGKV3-7A0A075B6H7 116 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 AGPAT2O15120 278 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 LINC00869P0C866 280 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 PAFAH1B2P68402 229 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 C1orf194Q5T5A4 169 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 ZNF546Q86UE3 836 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 GBGT1Q8N5D6 347 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 DCANP1Q8TF63 244 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 ASB13Q8WXK3 278 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 CITED4Q96RK1 184 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 SRD5A3Q9H8P0 318 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 MBD2Q9UBB5 411 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 PFDN2Q9UHV9 154 aa15.12■□□□□ 0.01
SKA3-205ENST00000465471 HUWE1Q7Z6Z7 4374 aaKnown RBP15.11■□□□□ 0.01
SKA3-205ENST00000465471 K7EQG2 157 aa15.11■□□□□ 0.01
SKA3-205ENST00000465471 TFPI2P48307 235 aa15.11■□□□□ 0.01
SKA3-205ENST00000465471 AP2S1P53680 142 aaPredicted RBP15.11■□□□□ 0.01
SKA3-205ENST00000465471 SBSPONQ8IVN8 264 aa15.11■□□□□ 0.01
SKA3-205ENST00000465471 UBQLN2Q9UHD9 624 aa15.11■□□□□ 0.01
SKA3-205ENST00000465471 GIPP09681 153 aaPredicted RBP15.1■□□□□ 0.01
SKA3-205ENST00000465471 ORM2P19652 201 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 SIGLEC15Q6ZMC9 328 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 OR5C1Q8NGR4 320 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 CHAC2Q8WUX2 184 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 GGTLC1Q9BX51 225 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 TUBA4BQ9H853 241 aa15.1■□□□□ 0.01
SKA3-205ENST00000465471 UBE2L5PA0A1B0GUS4 154 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 RBMY1BA6NDE4 496 aaKnown RBP15.09■□□□□ 0.01
SKA3-205ENST00000465471 RBMY1EA6NEQ0 496 aaKnown RBP15.09■□□□□ 0.01
SKA3-205ENST00000465471 RBMY1DP0C7P1 496 aaKnown RBP15.09■□□□□ 0.01
SKA3-205ENST00000465471 NHLRC4P0CG21 123 aaPredicted RBP15.09■□□□□ 0.01
SKA3-205ENST00000465471 CAMLGP49069 296 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 RPL11P62913 178 aaKnown RBP15.09■□□□□ 0.01
SKA3-205ENST00000465471 PXDC1Q5TGL8 231 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 FAM24BQ8N5W8 94 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 STXBP6Q8NFX7 210 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 OR1B1Q8NGR6 318 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 MAP6D1Q9H9H5 199 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 FBXL17Q9UF56 701 aa15.09■□□□□ 0.01
SKA3-205ENST00000465471 ZNF98A6NK75 572 aa15.08■□□□□ 0
SKA3-205ENST00000465471 H3BRN7 92 aa15.08■□□□□ 0
SKA3-205ENST00000465471 DNASE2O00115 360 aaPredicted RBP15.08■□□□□ 0
SKA3-205ENST00000465471 HYPMO75409 117 aa15.08■□□□□ 0
SKA3-205ENST00000465471 CMC4P56277 68 aaPredicted RBP15.08■□□□□ 0
SKA3-205ENST00000465471 PRR20EP86478 221 aa15.08■□□□□ 0
SKA3-205ENST00000465471 PRR20CP86479 221 aa15.08■□□□□ 0
SKA3-205ENST00000465471 PRR20DP86480 221 aa15.08■□□□□ 0
SKA3-205ENST00000465471 PRR20BP86481 221 aa15.08■□□□□ 0
SKA3-205ENST00000465471 PRR20AP86496 221 aa15.08■□□□□ 0
SKA3-205ENST00000465471 PATE2Q6UY27 113 aa15.08■□□□□ 0
SKA3-205ENST00000465471 ASCL2Q99929 193 aa15.08■□□□□ 0
SKA3-205ENST00000465471 NRN1Q9NPD7 142 aa15.08■□□□□ 0
SKA3-205ENST00000465471 DOK5Q9P104 306 aa15.08■□□□□ 0
SKA3-205ENST00000465471 HSPB11Q9Y547 144 aa15.08■□□□□ 0
SKA3-205ENST00000465471 MPDU1O75352 247 aa15.07■□□□□ 0
SKA3-205ENST00000465471 RPL12P30050 165 aaKnown RBP15.07■□□□□ 0
SKA3-205ENST00000465471 RAB31Q13636 194 aa15.07■□□□□ 0
SKA3-205ENST00000465471 OPCMLQ14982 345 aa15.07■□□□□ 0
SKA3-205ENST00000465471 HAGHQ16775 308 aa15.07■□□□□ 0
SKA3-205ENST00000465471 WFDC3Q8IUB2 231 aa15.07■□□□□ 0
SKA3-205ENST00000465471 PPP1R14BQ96C90 147 aa15.07■□□□□ 0
SKA3-205ENST00000465471 TM2D3Q9BRN9 247 aa15.07■□□□□ 0
SKA3-205ENST00000465471 SHANK2-AS3Q9BTD1 123 aa15.07■□□□□ 0
SKA3-205ENST00000465471 SLC25A39Q9BZJ4 359 aaPredicted RBP15.07■□□□□ 0
SKA3-205ENST00000465471 HIGD1AQ9Y241 93 aa15.07■□□□□ 0
SKA3-205ENST00000465471 S100A7P31151 101 aa15.06■□□□□ 0
SKA3-205ENST00000465471 RPL29P47914 159 aaKnown RBP15.06■□□□□ 0
SKA3-205ENST00000465471 RAP2BP61225 183 aa15.06■□□□□ 0
SKA3-205ENST00000465471 THAP6Q8TBB0 222 aa15.06■□□□□ 0
SKA3-205ENST00000465471 SCRT1Q9BWW7 348 aa15.06■□□□□ 0
SKA3-205ENST00000465471 ARL6Q9H0F7 186 aa15.06■□□□□ 0
SKA3-205ENST00000465471 SLC25A32Q9H2D1 315 aa15.06■□□□□ 0
SKA3-205ENST00000465471 SEPSECSQ9HD40 501 aaKnown RBP15.06■□□□□ 0
SKA3-205ENST00000465471 FGF7P21781 194 aa15.05■□□□□ -0
SKA3-205ENST00000465471 CLINT1Q14677 625 aa15.05■□□□□ -0
SKA3-205ENST00000465471 Q5BKY6 102 aa15.05■□□□□ -0
SKA3-205ENST00000465471 MIC13Q5XKP0 118 aa15.05■□□□□ -0
SKA3-205ENST00000465471 APRG1Q8IVJ8 170 aa15.05■□□□□ -0
SKA3-205ENST00000465471 OR8I2Q8N0Y5 310 aa15.05■□□□□ -0
SKA3-205ENST00000465471 C17orf77Q96MU5 243 aa15.05■□□□□ -0
SKA3-205ENST00000465471 NPCDR1Q9BY65 106 aa15.05■□□□□ -0
SKA3-205ENST00000465471 ARV1Q9H2C2 271 aa15.05■□□□□ -0
SKA3-205ENST00000465471 TENM3Q9P273 2699 aa15.05■□□□□ -0
SKA3-205ENST00000465471 SOCS3O14543 225 aa15.04■□□□□ -0
SKA3-205ENST00000465471 OR5G3P0C626 314 aa15.04■□□□□ -0
SKA3-205ENST00000465471 FGL1Q08830 312 aa15.04■□□□□ -0
SKA3-205ENST00000465471 ZNF124Q15973 351 aa15.04■□□□□ -0
SKA3-205ENST00000465471 TMEM37Q8WXS4 190 aa15.04■□□□□ -0
SKA3-205ENST00000465471 GPR82Q96P67 336 aa15.04■□□□□ -0
SKA3-205ENST00000465471 UHRF2Q96PU4 802 aa15.04■□□□□ -0
SKA3-205ENST00000465471 ATP5SQ99766 215 aa15.04■□□□□ -0
SKA3-205ENST00000465471 G3V3Q6 166 aa15.03■□□□□ -0
SKA3-205ENST00000465471 DEFB131AP59861 70 aa15.03■□□□□ -0
SKA3-205ENST00000465471 LEMD1Q68G75 181 aa15.03■□□□□ -0
SKA3-205ENST00000465471 WDR61Q9GZS3 305 aaKnown RBP15.03■□□□□ -0
SKA3-205ENST00000465471 SLC25A22Q9H936 323 aa15.03■□□□□ -0
SKA3-205ENST00000465471 SLC39A9Q9NUM3 307 aa15.03■□□□□ -0
SKA3-205ENST00000465471 STAB2Q8WWQ8 2551 aa15.03■□□□□ -0
SKA3-205ENST00000465471 ELOA3CA0A087WX78 387 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms