RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 UBE2L5PA0A1B0GUS4 154 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 FNDC10F2Z333 226 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 AGPAT2O15120 278 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 LINC00869P0C866 280 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 S100A11P31949 105 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 PAFAH1B2P68402 229 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 EWSR1Q01844 656 aaKnown RBP eCLIP8.66□□□□□ -1.02
CUX1-207ENST00000465461 HAGHQ16775 308 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
CUX1-207ENST00000465461 STX12Q86Y82 276 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 GGACTQ9BVM4 153 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 SLC25A22Q9H936 323 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 MAP6D1Q9H9H5 199 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 RETNQ9HD89 108 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 UQCC1Q9NVA1 299 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 MBD2Q9UBB5 411 aa8.66□□□□□ -1.02
CUX1-207ENST00000465461 K7EQG2 157 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 OR5G3P0C626 314 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 RPL35AP18077 110 aaKnown RBP8.65□□□□□ -1.02
CUX1-207ENST00000465461 DEFB131AP59861 70 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 BAXQ07812 192 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 CLINT1Q14677 625 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 VWC2Q2TAL6 325 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 Q5BKY6 102 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 MIC13Q5XKP0 118 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 PATE2Q6UY27 113 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 SIGLEC15Q6ZMC9 328 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 OR5C1Q8NGR4 320 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 THAP6Q8TBB0 222 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 DCANP1Q8TF63 244 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 UHRF2Q96PU4 802 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 TMEM147Q9BVK8 224 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 SCRT1Q9BWW7 348 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 SLC25A31Q9H0C2 315 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 ARL6Q9H0F7 186 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 SLC45A2Q9UMX9 530 aa8.65□□□□□ -1.02
CUX1-207ENST00000465461 HELTA6NFD8 242 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 ZNF98A6NK75 572 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 CFDP00746 253 aaPredicted RBP8.64□□□□□ -1.03
CUX1-207ENST00000465461 CD5P06127 495 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 ZNF688P0C7X2 276 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 FGF7P21781 194 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 CAMLGP49069 296 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 HBG1P69891 147 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 HBG2P69892 147 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 OR8I2Q8N0Y5 310 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 SLC25A39Q9BZJ4 359 aaPredicted RBP8.64□□□□□ -1.03
CUX1-207ENST00000465461 SMIM3Q9BZL3 60 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 SLC25A32Q9H2D1 315 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 WDR83OSQ9Y284 106 aa8.64□□□□□ -1.03
CUX1-207ENST00000465461 LOC102724200A0A096LPH7 203 aaPredicted RBP8.63□□□□□ -1.03
CUX1-207ENST00000465461 H3BRN7 92 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 HYPMO75409 117 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 NHLRC4P0CG21 123 aaPredicted RBP8.63□□□□□ -1.03
CUX1-207ENST00000465461 SELENOTP62341 195 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 ATP6V1FQ16864 119 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 ZNF546Q86UE3 836 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 C17orf77Q96MU5 243 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 GGTLC1Q9BX51 225 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 ARV1Q9H2C2 271 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 PLA2G2EQ9NZK7 142 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 HIGD1AQ9Y241 93 aa8.63□□□□□ -1.03
CUX1-207ENST00000465461 DNAH9Q9NYC9 4486 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 TGP01266 2768 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 TRAV2A0A0B4J234 112 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 KNCNA6PVL3 124 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 SNRPCP09234 159 aaKnown RBP8.62□□□□□ -1.03
CUX1-207ENST00000465461 PET100P0DJ07 73 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 RPL12P30050 165 aaKnown RBP8.62□□□□□ -1.03
CUX1-207ENST00000465461 AP2S1P53680 142 aaPredicted RBP8.62□□□□□ -1.03
CUX1-207ENST00000465461 DEFB1P60022 68 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 PLP1P60201 277 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 RAP2BP61225 183 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 PSMG4Q5JS54 123 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 MORN5Q5VZ52 161 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 CHAC2Q8WUX2 184 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 TMEM37Q8WXS4 190 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 FAM110AQ9BQ89 295 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 TM2D3Q9BRN9 247 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 SHANK2-AS3Q9BTD1 123 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 RSG1Q9BU20 258 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 WFDC1Q9HC57 220 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 NRN1Q9NPD7 142 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 HSPB11Q9Y547 144 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 U3KQK5 164 aa8.62□□□□□ -1.03
CUX1-207ENST00000465461 TRAV5A0A0B4J249 113 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 LYL1P12980 280 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 NUP62P37198 522 aaPredicted RBP8.61□□□□□ -1.03
CUX1-207ENST00000465461 PRR20EP86478 221 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 PRR20CP86479 221 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 PRR20DP86480 221 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 PRR20BP86481 221 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 PRR20AP86496 221 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 FGL1Q08830 312 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 OPCMLQ14982 345 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 C1orf194Q5T5A4 169 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 IGFL4Q6B9Z1 124 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 LINC00052Q96N35 136 aa8.61□□□□□ -1.03
CUX1-207ENST00000465461 RCHY1Q96PM5 261 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms