RNA–Protein interactions for RNA: ENST00000465339.5

COL28A1-206, Transcript of collagen type XXVIII alpha 1 chain, humanhuman

TSL 3

Gene COL28A1, Length 722 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1-206ENST00000465339 PBDC1Q9BVG4 233 aa9.66□□□□□ -0.86
COL28A1-206ENST00000465339 RCL1Q9Y2P8 373 aaKnown RBP9.66□□□□□ -0.86
COL28A1-206ENST00000465339 INMT-MINDY4F8WBC2 141 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 K7EQG2 157 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 METTL15P1P0C7V9 234 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 DLK1P80370 383 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 OR2F1Q13607 317 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 C1orf194Q5T5A4 169 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 SIGLEC15Q6ZMC9 328 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 ACOT7LQ6ZUV0 252 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 STPG3Q8N7X2 389 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 BPIFCQ8NFQ6 507 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 MARVELD1Q9BSK0 173 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 NPVFQ9HCQ7 196 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 FBXL17Q9UF56 701 aa9.65□□□□□ -0.86
COL28A1-206ENST00000465339 HUWE1Q7Z6Z7 4374 aaKnown RBP9.64□□□□□ -0.87
COL28A1-206ENST00000465339 SMCO3A2RU48 225 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 K7EPK0 472 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 PVALBP20472 110 aaPredicted RBP9.64□□□□□ -0.87
COL28A1-206ENST00000465339 S100A7P31151 101 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 DEFB131AP59861 70 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 LYZP61626 148 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 IL15RAQ13261 267 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 Q6ZWC4 215 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 DCANP1Q8TF63 244 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 GGACTQ9BVM4 153 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 SEPSECSQ9HD40 501 aaKnown RBP9.64□□□□□ -0.87
COL28A1-206ENST00000465339 MGAT4CQ9UBM8 478 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 SLC45A2Q9UMX9 530 aa9.64□□□□□ -0.87
COL28A1-206ENST00000465339 LSM5Q9Y4Y9 91 aaKnown RBP9.64□□□□□ -0.87
COL28A1-206ENST00000465339 C3orf84H3BNL1 204 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 DEDDO75618 318 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 CCNKO75909 580 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
COL28A1-206ENST00000465339 SELENOTP62341 195 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 ZNF124Q15973 351 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 PPP1R14BQ96C90 147 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 EDA2RQ9HAV5 297 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 RETNQ9HD89 108 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 NRN1Q9NPD7 142 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 TP53TG1Q9Y2A0 90 aa9.63□□□□□ -0.87
COL28A1-206ENST00000465339 BCAP31P51572 246 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 RRAS2P62070 204 aaPredicted RBP9.62□□□□□ -0.87
COL28A1-206ENST00000465339 CYCSP99999 105 aaKnown RBP9.62□□□□□ -0.87
COL28A1-206ENST00000465339 TEPPQ6URK8 271 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 CYP2G1PQ6ZSU1 146 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 FAM24BQ8N5W8 94 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 MUC7Q8TAX7 377 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 OVOL2Q9BRP0 275 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 CSTL1Q9H114 145 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 C11orf1Q9H5F2 150 aa9.62□□□□□ -0.87
COL28A1-206ENST00000465339 SPRY2O43597 315 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 ZNF688P0C7X2 276 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 ORM2P19652 201 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 GATA2P23769 480 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-206ENST00000465339 CAV2P51636 162 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 S100A10P60903 97 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 SNRPD3P62318 126 aaKnown RBP9.61□□□□□ -0.87
COL28A1-206ENST00000465339 RAB32Q13637 225 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 LEMD1Q68G75 181 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 TMEM182Q6ZP80 229 aaPredicted RBP9.61□□□□□ -0.87
COL28A1-206ENST00000465339 OR8I2Q8N0Y5 310 aa9.61□□□□□ -0.87
COL28A1-206ENST00000465339 RLN2P04090 185 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 PLP1P60201 277 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 ARL16Q0P5N6 197 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 S100A7AQ86SG5 101 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 STHQ8IWL8 128 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 RNF183Q96D59 192 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 GPR82Q96P67 336 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 TMEM147Q9BVK8 224 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 NMES1Q9C002 83 aa9.6□□□□□ -0.87
COL28A1-206ENST00000465339 MRPL18Q9H0U6 180 aaKnown RBP9.6□□□□□ -0.87
COL28A1-206ENST00000465339 LYRM2Q9NU23 88 aaPredicted RBP9.6□□□□□ -0.87
COL28A1-206ENST00000465339 AGRNO00468 2067 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 FAM24AA6NFZ4 105 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 ZNF98A6NK75 572 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 GOSR2O14653 212 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 HYPMO75409 117 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 LYL1P12980 280 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 S100A11P31949 105 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 ID1P41134 155 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 SULT1A1P50225 295 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 RAP2BP61225 183 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 SLC38A11Q08AI6 406 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 DEFB135Q30KP9 77 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 PSMG4Q5JS54 123 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 PXDC1Q5TGL8 231 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 SAMD13Q5VXD3 122 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 OR1B1Q8NGR6 318 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 RNF24Q9Y225 148 aa9.59□□□□□ -0.87
COL28A1-206ENST00000465339 AGPAT2O15120 278 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 SSNA1O43805 119 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 CST7O76096 145 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 SIX6O95475 246 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 LINC00869P0C866 280 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 GALR1P47211 349 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 MEOX2P50222 304 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 HBG1P69891 147 aa9.58□□□□□ -0.88
COL28A1-206ENST00000465339 HBG2P69892 147 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms