RNA–Protein interactions for RNA: ENST00000465039.5

LIMD1-203, Transcript of LIM domains containing 1, humanhuman

TSL 5

Gene LIMD1, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-203ENST00000465039 RNF126Q9BV68 326 aa10.26□□□□□ -0.77
LIMD1-203ENST00000465039 APOHP02749 345 aaPredicted RBP10.25□□□□□ -0.77
LIMD1-203ENST00000465039 LINC00869P0C866 280 aa10.25□□□□□ -0.77
LIMD1-203ENST00000465039 IGHV4-30-4P0DP06 118 aa10.25□□□□□ -0.77
LIMD1-203ENST00000465039 PBDC1Q9BVG4 233 aa10.25□□□□□ -0.77
LIMD1-203ENST00000465039 MBD2Q9UBB5 411 aa10.25□□□□□ -0.77
LIMD1-203ENST00000465039 ELOA3CA0A087WX78 387 aaPredicted RBP10.24□□□□□ -0.77
LIMD1-203ENST00000465039 IGHV3-49A0A0A0MS15 119 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 AGPAT2O15120 278 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 HYPMO75409 117 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 CD7P09564 240 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 CAMLGP49069 296 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 OR2F1Q13607 317 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 MS4A6AQ9H2W1 248 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 NRN1Q9NPD7 142 aa10.24□□□□□ -0.77
LIMD1-203ENST00000465039 IGHV3OR16-13A0A075B7E8 117 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 IGHV3-74A0A0B4J1X5 117 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 OR11H12B2RN74 326 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 FRMD6-AS1P0C7T7 363 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 RPL12P30050 165 aaKnown RBP10.23□□□□□ -0.77
LIMD1-203ENST00000465039 RPL29P47914 159 aaKnown RBP10.23□□□□□ -0.77
LIMD1-203ENST00000465039 MEOX2P50222 304 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PRR20EP86478 221 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PRR20CP86479 221 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PRR20DP86480 221 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PRR20BP86481 221 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PRR20AP86496 221 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 ODF3L2Q3SX64 289 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 SIGLEC15Q6ZMC9 328 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 STPG3Q8N7X2 389 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 MGST2Q99735 147 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 GGTLC1Q9BX51 225 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 PARD6GQ9BYG4 376 aaPredicted RBP10.23□□□□□ -0.77
LIMD1-203ENST00000465039 HIGD1AQ9Y241 93 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 HSPB11Q9Y547 144 aa10.23□□□□□ -0.77
LIMD1-203ENST00000465039 UBE2L5PA0A1B0GUS4 154 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 K7EQG2 157 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 DNASE2O00115 360 aaPredicted RBP10.22□□□□□ -0.77
LIMD1-203ENST00000465039 RPL11P62913 178 aaKnown RBP10.22□□□□□ -0.77
LIMD1-203ENST00000465039 NHLH2Q02577 135 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 OPCMLQ14982 345 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 LINC00322Q6ZN03 302 aaPredicted RBP10.22□□□□□ -0.77
LIMD1-203ENST00000465039 Q6ZRG5 221 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 OR8I2Q8N0Y5 310 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 OR1B1Q8NGR6 318 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 DCANP1Q8TF63 244 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 PPP1R14BQ96C90 147 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 AQP10Q96PS8 301 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 PFDN5Q99471 154 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 ATP5SQ99766 215 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 SHANK2-AS3Q9BTD1 123 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 TUBA4BQ9H853 241 aa10.22□□□□□ -0.77
LIMD1-203ENST00000465039 STAB2Q8WWQ8 2551 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 IGHV3-66A0A0C4DH42 116 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 ZNF98A6NK75 572 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 H3BRN7 92 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 RPL7P18124 248 aaKnown RBP10.21□□□□□ -0.77
LIMD1-203ENST00000465039 ORM2P19652 201 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 GALR1P47211 349 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 TMEM182Q6ZP80 229 aaPredicted RBP10.21□□□□□ -0.77
LIMD1-203ENST00000465039 OR1L4Q8NGR5 311 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 NPCDR1Q9BY65 106 aa10.21□□□□□ -0.77
LIMD1-203ENST00000465039 SLC25A39Q9BZJ4 359 aaPredicted RBP10.21□□□□□ -0.77
LIMD1-203ENST00000465039 KIR2DL5BA0A0G2JN68 375 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 KIR2DL5BA0A0G2JPC4 375 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 FGF7P21781 194 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 GATA2P23769 480 aaPredicted RBP10.2□□□□□ -0.78
LIMD1-203ENST00000465039 SNRPD3P62318 126 aaKnown RBP10.2□□□□□ -0.78
LIMD1-203ENST00000465039 KIR2DL5AQ8N109 375 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 STXBP6Q8NFX7 210 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 OR2T35Q8NGX2 323 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 KIR2DL5BQ8NHK3 375 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 GATAD1Q8WUU5 269 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 WDR61Q9GZS3 305 aaKnown RBP10.2□□□□□ -0.78
LIMD1-203ENST00000465039 ARL6Q9H0F7 186 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 ARV1Q9H2C2 271 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 SRD5A3Q9H8P0 318 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 MAP6D1Q9H9H5 199 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 SLC39A9Q9NUM3 307 aa10.2□□□□□ -0.78
LIMD1-203ENST00000465039 C17orf112F2Z3M2 114 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 ISLRO14498 428 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 COX7A2P2O60397 106 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 OR5G3P0C626 314 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 PSMB3P49720 205 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 B2MP61769 119 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 ZNF266Q14584 549 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 DEFB125Q8N687 156 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 ZNF709Q8N972 641 aa10.19□□□□□ -0.78
LIMD1-203ENST00000465039 COL7A1Q02388 2944 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 A0A087X0K7 114 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 IFNA5P01569 189 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 CXCL2P19875 107 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 APOC4P55056 127 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 CLINT1Q14677 625 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 C10orf113Q5VZT2 155 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 GBGT1Q8N5D6 347 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 INO80EQ8NBZ0 244 aaPredicted RBP10.18□□□□□ -0.78
LIMD1-203ENST00000465039 TM2D3Q9BRN9 247 aa10.18□□□□□ -0.78
LIMD1-203ENST00000465039 SLC25A32Q9H2D1 315 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms