RNA–Protein interactions for RNA: ENST00000464526.1

LST1-220, leukocyte specific transcript 1, humanhuman

TSL 1 (best)

Gene LST1, Length 1,832 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-220ENST00000464526 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
LST1-220ENST00000464526 C9orf62Q8N4C0 152 aa13.22□□□□□ -0.29
LST1-220ENST00000464526 U3KQE9 123 aa13.22□□□□□ -0.29
LST1-220ENST00000464526 SORL1Q92673 2214 aa13.22□□□□□ -0.29
LST1-220ENST00000464526 IGKV3-7A0A075B6H7 116 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 SCGB2A1O75556 95 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 ELLP55199 621 aaPredicted RBP13.21□□□□□ -0.29
LST1-220ENST00000464526 DEFB114Q30KQ6 69 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 SPATA31B1PQ5VZV4 182 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 METTL26Q96S19 204 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 GINS3Q9BRX5 216 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 VSIRQ9H7M9 311 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 SLC39A9Q9NUM3 307 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 MRPL27Q9P0M9 148 aaKnown RBP13.21□□□□□ -0.29
LST1-220ENST00000464526 BOLA1Q9Y3E2 137 aa13.21□□□□□ -0.29
LST1-220ENST00000464526 ATP6V0CP27449 155 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 C9orf66Q5T8R8 295 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 TMUB2Q71RG4 321 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 RABAC1Q9UI14 185 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 OR5G3P0C626 314 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 NPPCP23582 126 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 RPL29P47914 159 aaKnown RBP13.2□□□□□ -0.3
LST1-220ENST00000464526 DYNLRB2Q8TF09 96 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 ARV1Q9H2C2 271 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 SIGLEC8Q9NYZ4 499 aa13.2□□□□□ -0.3
LST1-220ENST00000464526 BCL2L11O43521 198 aa13.19□□□□□ -0.3
LST1-220ENST00000464526 BUB3O43684 328 aa13.19□□□□□ -0.3
LST1-220ENST00000464526 IFNA5P01569 189 aa13.19□□□□□ -0.3
LST1-220ENST00000464526 HNRNPCP07910 306 aaKnown RBP eCLIP13.19□□□□□ -0.3
LST1-220ENST00000464526 SNRPCP09234 159 aaKnown RBP13.19□□□□□ -0.3
LST1-220ENST00000464526 PLP1P60201 277 aa13.19□□□□□ -0.3
LST1-220ENST00000464526 SELENOTP62341 195 aa13.19□□□□□ -0.3
LST1-220ENST00000464526 TRAV5A0A0B4J249 113 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 WIPF1O43516 503 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 MPDU1O75352 247 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 FABP1P07148 127 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 GLMPQ8WWB7 406 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 HYLS1Q96M11 299 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 C17orf77Q96MU5 243 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 ARPC5LQ9BPX5 153 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 PARD6GQ9BYG4 376 aaPredicted RBP13.18□□□□□ -0.3
LST1-220ENST00000464526 SLC25A39Q9BZJ4 359 aaPredicted RBP13.18□□□□□ -0.3
LST1-220ENST00000464526 SLC25A22Q9H936 323 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 PLA2G2EQ9NZK7 142 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 H3BRN7 92 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 HYPMO75409 117 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 ZNF266Q14584 549 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 BEAN1Q3B7T3 259 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
LST1-220ENST00000464526 PFDN1O60925 122 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 RAB2AP61019 212 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 RAB31Q13636 194 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 FFAR4Q5NUL3 377 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 C16orf54Q6UWD8 224 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 GBGT1Q8N5D6 347 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 MCRIP2Q9BUT9 160 aaKnown RBP13.17□□□□□ -0.3
LST1-220ENST00000464526 SLC25A32Q9H2D1 315 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 SEPSECSQ9HD40 501 aaKnown RBP13.17□□□□□ -0.3
LST1-220ENST00000464526 HIGD1AQ9Y241 93 aa13.17□□□□□ -0.3
LST1-220ENST00000464526 ZNF98A6NK75 572 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 COX7A2P2O60397 106 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 TCF24Q7RTU0 167 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 LINC00305Q7Z4B0 112 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 MARC2Q969Z3 335 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 PRR25Q96S07 402 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 SHANK2-AS3Q9BTD1 123 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 ZNF471Q9BX82 626 aaPredicted RBP13.16□□□□□ -0.3
LST1-220ENST00000464526 A0A0D9SG52 128 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 ZNF785A8K8V0 405 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 TFPI2P48307 235 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 FAM24BQ8N5W8 94 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 PPP1R14BQ96C90 147 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 SMAD5-AS1Q9Y6J3 95 aa13.16□□□□□ -0.3
LST1-220ENST00000464526 PRB4P10163 310 aaPredicted RBP13.15□□□□□ -0.3
LST1-220ENST00000464526 EGFEM1PQ0D2K5 195 aa13.15□□□□□ -0.3
LST1-220ENST00000464526 MIR17HGQ75NE6 70 aa13.15□□□□□ -0.3
LST1-220ENST00000464526 ZNF709Q8N972 641 aa13.15□□□□□ -0.3
LST1-220ENST00000464526 WFDC10AQ9H1F0 79 aa13.15□□□□□ -0.3
LST1-220ENST00000464526 KANTRA0A1W2PQU2 76 aa13.14□□□□□ -0.31
LST1-220ENST00000464526 C10orf113Q5VZT2 155 aa13.14□□□□□ -0.31
LST1-220ENST00000464526 Q6ZRG5 221 aa13.14□□□□□ -0.31
LST1-220ENST00000464526 SSX7Q7RTT5 188 aa13.14□□□□□ -0.31
LST1-220ENST00000464526 FBN3Q75N90 2809 aa13.14□□□□□ -0.31
LST1-220ENST00000464526 H3BTX0 84 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 TAAR5O14804 337 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 CFDP00746 253 aaPredicted RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 INSL3P51460 131 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 DNAJC4Q9NNZ3 241 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 BORCS7-ASMTA0A0B4J1R7 106 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 C17orf112F2Z3M2 114 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 MRPS12O15235 138 aaKnown RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 HMGB3O15347 200 aaKnown RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 CD7P09564 240 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 KPRPQ5T749 579 aaPredicted RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 WFDC3Q8IUB2 231 aa13.13□□□□□ -0.31
LST1-220ENST00000464526 TECRQ9NZ01 308 aaKnown RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 ZNF256Q9Y2P7 627 aaPredicted RBP13.13□□□□□ -0.31
LST1-220ENST00000464526 TIMM9Q9Y5J7 89 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms