RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 UBQLN2Q9UHD9 624 aa12.73□□□□□ -0.37
VPS52-215ENST00000464425 U3KQK5 164 aa12.73□□□□□ -0.37
VPS52-215ENST00000464425 UBE2L5PA0A1B0GUS4 154 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 HMSDA8MTL9 139 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 SMLR1H3BR10 107 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 AGPAT2O15120 278 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 CRYBB3P26998 211 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 BMI1P35226 326 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 CLINT1Q14677 625 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 TMEM182Q6ZP80 229 aaPredicted RBP12.72□□□□□ -0.37
VPS52-215ENST00000464425 TCF24Q7RTU0 167 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 AKAP14Q86UN6 197 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 GBGT1Q8N5D6 347 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 RNF125Q96EQ8 232 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 MGST2Q99735 147 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 PARD6GQ9BYG4 376 aaPredicted RBP12.72□□□□□ -0.37
VPS52-215ENST00000464425 VSIRQ9H7M9 311 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 SLC45A2Q9UMX9 530 aa12.72□□□□□ -0.37
VPS52-215ENST00000464425 RNF222A6NCQ9 220 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 RBMY1BA6NDE4 496 aaKnown RBP12.71□□□□□ -0.37
VPS52-215ENST00000464425 RBMY1EA6NEQ0 496 aaKnown RBP12.71□□□□□ -0.37
VPS52-215ENST00000464425 RBMY1DP0C7P1 496 aaKnown RBP12.71□□□□□ -0.37
VPS52-215ENST00000464425 CAMLGP49069 296 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 PLP1P60201 277 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 RPL11P62913 178 aaKnown RBP12.71□□□□□ -0.37
VPS52-215ENST00000464425 OR2F1Q13607 317 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 USF2Q15853 346 aaPredicted RBP12.71□□□□□ -0.37
VPS52-215ENST00000464425 HAGHQ16775 308 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 FAM90A2PQ658T7 463 aa12.71□□□□□ -0.37
VPS52-215ENST00000464425 A0A1W2PS18 150 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 OR4C46A6NHA9 309 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 FGF7P21781 194 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 GATA2P23769 480 aaPredicted RBP12.7□□□□□ -0.38
VPS52-215ENST00000464425 RPL29P47914 159 aaKnown RBP12.7□□□□□ -0.38
VPS52-215ENST00000464425 WFDC3Q8IUB2 231 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 OR11H4Q8NGC9 324 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 SMIM3Q9BZL3 60 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 WDR61Q9GZS3 305 aaKnown RBP12.7□□□□□ -0.38
VPS52-215ENST00000464425 TMEM231Q9H6L2 316 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 PFDN2Q9UHV9 154 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 RABAC1Q9UI14 185 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 U3KQE9 123 aa12.7□□□□□ -0.38
VPS52-215ENST00000464425 ARPC5O15511 151 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 IFNA5P01569 189 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 CD5P06127 495 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 HNRNPCP07910 306 aaKnown RBP eCLIP12.69□□□□□ -0.38
VPS52-215ENST00000464425 EIF2B2P49770 351 aaKnown RBP12.69□□□□□ -0.38
VPS52-215ENST00000464425 AP2S1P53680 142 aaPredicted RBP12.69□□□□□ -0.38
VPS52-215ENST00000464425 PRR20EP86478 221 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 PRR20CP86479 221 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 PRR20DP86480 221 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 PRR20BP86481 221 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 PRR20AP86496 221 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 ZNF345Q14585 488 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 LINC00322Q6ZN03 302 aaPredicted RBP12.69□□□□□ -0.38
VPS52-215ENST00000464425 NARS2Q96I59 477 aaKnown RBP12.69□□□□□ -0.38
VPS52-215ENST00000464425 GGTLC1Q9BX51 225 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 NPCDR1Q9BY65 106 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 MFFQ9GZY8 342 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 ZMAT4Q9H898 229 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 WFDC1Q9HC57 220 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 FBXL17Q9UF56 701 aa12.69□□□□□ -0.38
VPS52-215ENST00000464425 TAAR5O14804 337 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 LINC00869P0C866 280 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 S100A7P31151 101 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 LYZP61626 148 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 PAFAH1B2P68402 229 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 ZNF266Q14584 549 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 OPCMLQ14982 345 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 ODF3L2Q3SX64 289 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 SCGB1C1Q8TD33 95 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 RCHY1Q96PM5 261 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 CITED4Q96RK1 184 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 TM2D3Q9BRN9 247 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 PBDC1Q9BVG4 233 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 MS4A6AQ9H2W1 248 aa12.68□□□□□ -0.38
VPS52-215ENST00000464425 DNASE2O00115 360 aaPredicted RBP12.67□□□□□ -0.38
VPS52-215ENST00000464425 HYPMO75409 117 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 C1QBP02746 253 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 ORM2P19652 201 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 Q6ZRG5 221 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 STPG3Q8N7X2 389 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 ZNF709Q8N972 641 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 GRAMD2BQ96HH9 432 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 KCNIP2Q9NS61 270 aa12.67□□□□□ -0.38
VPS52-215ENST00000464425 ELOA3CA0A087WX78 387 aaPredicted RBP12.66□□□□□ -0.38
VPS52-215ENST00000464425 A0A0D9SG52 128 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 C17orf112F2Z3M2 114 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 BUB3O43684 328 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 S100A7AQ86SG5 101 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 APRG1Q8IVJ8 170 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 KCNRGQ8N5I3 272 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 OR1B1Q8NGR6 318 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 HYLS1Q96M11 299 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 ARL6Q9H0F7 186 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 SLC39A9Q9NUM3 307 aa12.66□□□□□ -0.38
VPS52-215ENST00000464425 B2MP61769 119 aa12.65□□□□□ -0.38
VPS52-215ENST00000464425 MIC13Q5XKP0 118 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms